Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 4.4e-92 341.3 172 100.0
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 4.7e-78 294.7 157 91.7
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 8.1e-78 293.9 161 90.7
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 2.3e-77 292.4 174 84.5
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 4.0e-77 291.6 161 88.2
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 4.0e-77 291.6 161 88.2
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 5.2e-77 291.2 161 87.6
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 2.6e-76 288.9 161 87.0
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 4.4e-76 288.1 161 87.0
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 7.5e-76 287.3 161 87.6
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.3e-75 286.6 158 87.3
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 2.9e-75 285.4 161 87.0
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.7e-75 285.0 158 86.7
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 8.3e-75 283.9 158 87.3
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 1.1e-74 283.5 161 85.7
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 1.1e-74 283.5 161 85.7
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.4e-74 282.3 168 82.7
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.4e-74 282.3 168 82.7
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 2.4e-74 282.3 162 85.2
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 3.2e-74 282.0 161 83.2
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 3.2e-74 282.0 161 86.3
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 3.2e-74 282.0 158 86.7
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 5.4e-74 281.2 161 85.1
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.6e-73 279.6 161 84.5
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 3.5e-73 278.5 161 85.7
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 3.5e-73 278.5 161 83.9
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 3.5e-73 278.5 161 85.1
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 4.6e-73 278.1 171 80.7
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 4.6e-73 278.1 161 83.2
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 6.0e-73 277.7 161 83.2
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 6.0e-73 277.7 160 83.8
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 7.8e-73 277.3 161 82.6
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 1.0e-72 276.9 161 83.2
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.0e-72 276.9 161 81.4
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.3e-72 276.6 161 83.2
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 1.3e-72 276.6 161 82.6
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.7e-72 276.2 161 82.0
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 1.7e-72 276.2 161 83.9
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 2.3e-72 275.8 161 83.2
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 2.3e-72 275.8 161 83.2
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 2.3e-72 275.8 161 85.1
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 3.0e-72 275.4 174 78.2
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 3.0e-72 275.4 158 82.9
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 3.9e-72 275.0 162 83.3
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.9e-72 275.0 161 83.2
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 3.9e-72 275.0 158 84.8
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 5.1e-72 274.6 161 83.2
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 6.6e-72 274.2 157 79.6
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 6.6e-72 274.2 161 80.7
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 6.6e-72 274.2 161 83.2
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 8.6e-72 273.9 161 83.9
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 1.1e-71 273.5 161 82.0
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 1.1e-71 273.5 161 82.0
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 1.1e-71 273.5 161 82.6
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 1.1e-71 273.5 161 83.2
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.1e-71 273.5 161 82.0
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 1.1e-71 273.5 165 81.8
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 1.5e-71 273.1 161 82.0
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.5e-71 273.1 161 82.0
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 1.5e-71 273.1 174 77.6
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 1.5e-71 273.1 161 82.0
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 1.5e-71 273.1 161 82.0
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.5e-71 273.1 157 79.6
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.9e-71 272.7 161 82.6
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.9e-71 272.7 161 82.0
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 2.5e-71 272.3 161 82.0
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 5.6e-71 271.2 161 81.4
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 7.3e-71 270.8 158 83.5
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 9.5e-71 270.4 188 72.3
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 9.5e-71 270.4 161 81.4
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 1.2e-70 270.0 161 80.1
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 1.6e-70 269.6 168 79.8
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.6e-70 269.6 161 80.7
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.6e-70 269.6 157 80.9
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.6e-70 269.6 157 80.9
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 2.1e-70 269.2 161 81.4
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 2.8e-70 268.9 158 82.9
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 6.2e-70 267.7 157 79.6
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 1.1e-69 266.9 161 79.5
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 1.1e-69 266.9 161 80.7
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.5e-68 263.1 182 74.7
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.5e-68 263.1 182 74.7
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.8e-68 261.2 161 78.9
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.3e-67 260.0 160 79.4
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 8.4e-67 257.3 158 75.3
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 1.9e-66 256.1 156 76.9
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 1.9e-66 256.1 159 77.4
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 4.1e-66 255.0 158 74.7
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 5.4e-66 254.6 161 79.5
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 5.4e-66 254.6 161 79.5
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.6e-65 253.1 140 85.7
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 2.7e-65 252.3 171 70.8
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 1.1e-61 240.4 139 82.7
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 1.1e-61 240.4 139 82.7
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 1.1e-61 240.4 139 82.7
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 1.8e-61 239.6 168 66.1
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 5.8e-60 234.6 156 72.4
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 1.3e-59 233.4 161 73.9
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.9e-59 232.3 185 64.9
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 4.9e-59 231.5 158 70.9
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 1.4e-58 229.9 129 86.0
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 2.4e-58 229.2 157 69.4
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 3.2e-58 228.8 133 83.5
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.2e-58 228.8 145 79.3
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.1e-57 226.1 165 72.1
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 1.3e-56 223.4 144 76.4
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 1.5e-55 219.9 157 67.5
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 1.5e-55 219.9 157 66.9
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 1.3e-54 216.9 115 89.6
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 3.6e-54 215.3 115 88.7
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 3.1e-53 212.2 126 80.2
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 1.5e-52 209.9 157 64.3
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 2.0e-52 209.5 161 69.6
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.6e-52 209.1 161 69.6
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 7.6e-52 207.6 157 63.1
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 7.6e-52 207.6 115 85.2
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 7.6e-52 207.6 147 72.8
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 9.9e-52 207.2 116 85.3
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 1.3e-51 206.8 186 61.8
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 2.9e-51 205.7 115 83.5
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 3.5e-49 198.7 135 68.9
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 1.4e-45 186.8 245 46.9
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.5e-44 183.3 112 75.0
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 4.2e-42 175.3 158 57.6
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 2.1e-41 172.9 150 52.7
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 3.3e-39 165.6 133 66.2
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 4.8e-38 161.8 156 50.6
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 1.0e-35 154.1 139 55.4
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 2.9e-35 152.5 120 69.2
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.5e-34 149.4 171 53.2
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-29 134.0 94 70.2
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.4e-29 132.9 161 50.9
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 1.1e-21 107.5 77 70.1
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.1e-13 80.9 161 38.5
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 2.0e-12 76.6 54 66.7


User provided reference genes

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