Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 1.4e-116 422.9 209 100.0
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 6.6e-74 281.2 190 72.1
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 4.6e-67 258.5 197 66.5
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.7e-66 256.5 205 65.9
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 7.3e-65 251.1 193 67.4
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 1.5e-62 243.4 163 71.2
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 7.0e-60 234.6 199 64.8
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 7.0e-60 234.6 199 64.8
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 6.0e-59 231.5 199 63.8
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 3.0e-58 229.2 202 60.4
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 2.8e-56 222.6 190 60.5
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 4.7e-56 221.9 201 60.7
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 6.2e-56 221.5 211 59.7
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 6.2e-56 221.5 208 58.7
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 8.1e-56 221.1 207 58.0
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 8.1e-56 221.1 208 58.2
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 1.1e-55 220.7 202 59.4
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 1.4e-55 220.3 213 57.3
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 1.5e-54 216.9 190 59.5
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 1.5e-54 216.9 204 58.3
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 5.8e-54 214.9 191 59.2
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.8e-54 214.9 195 61.5
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 5.8e-54 214.9 204 57.4
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 9.9e-54 214.2 211 55.5
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 3.7e-53 212.2 199 59.3
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 4.9e-53 211.8 174 63.8
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.4e-52 210.3 207 57.5
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.4e-52 209.5 174 60.9
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 4.1e-52 208.8 205 54.6
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 4.1e-52 208.8 206 56.8
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.1e-51 206.5 202 54.0
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.3e-50 203.8 184 60.3
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 2.3e-50 203.0 198 56.1
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 2.3e-50 203.0 190 56.3
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 3.9e-50 202.2 147 70.1
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 3.9e-50 202.2 147 70.1
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.6e-48 196.8 192 58.3
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 1.6e-48 196.8 203 54.2
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 4.7e-48 195.3 204 53.4
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 4.7e-48 195.3 200 53.5
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 4.7e-48 195.3 180 53.9
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 8.1e-48 194.5 182 58.8
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 4.0e-47 192.2 172 59.3
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 4.0e-47 192.2 194 55.7
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 9.9e-46 187.6 97 83.5
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 2.2e-45 186.4 189 52.4
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 2.2e-45 186.4 189 52.4
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 2.2e-45 186.4 238 49.2
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 4.9e-45 185.3 196 54.1
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 4.9e-45 185.3 191 53.9
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 4.9e-45 185.3 198 52.0
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 1.4e-44 183.7 185 51.4
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.4e-44 183.7 185 51.4
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.4e-44 183.7 201 50.2
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 1.9e-44 183.3 186 53.2
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.4e-44 183.0 212 51.4
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 3.2e-44 182.6 184 51.1
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 4.2e-44 182.2 189 51.9
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 4.2e-44 182.2 189 51.9
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 4.2e-44 182.2 168 59.5
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 1.6e-43 180.3 186 52.2
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 2.1e-43 179.9 199 51.3
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 2.7e-43 179.5 169 59.2
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 2.7e-43 179.5 201 51.2
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 3.5e-43 179.1 184 52.2
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 3.5e-43 179.1 204 49.5
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 6.0e-43 178.3 169 58.0
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.0e-42 177.6 182 55.5
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 1.0e-42 177.6 99 77.8
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 3.0e-42 176.0 185 51.9
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 3.0e-42 176.0 181 52.5
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 3.0e-42 176.0 142 58.5
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.5e-41 172.9 174 54.0
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 3.3e-41 172.6 211 49.8
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 5.6e-41 171.8 175 54.9
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 5.6e-41 171.8 117 65.8
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 7.3e-41 171.4 133 60.9
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 9.6e-41 171.0 204 49.0
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.3e-40 170.6 182 51.1
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 1.3e-40 170.6 197 50.3
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 2.1e-40 169.9 147 59.2
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 2.8e-40 169.5 212 48.1
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 2.8e-40 169.5 111 64.9
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 3.6e-40 169.1 206 49.0
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.4e-39 167.2 191 48.7
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.4e-39 166.4 129 63.6
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 4.0e-39 165.6 181 50.3
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 2.0e-38 163.3 177 51.4
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 3.4e-38 162.5 148 56.1
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 9.9e-38 161.0 137 56.9
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.6e-35 153.7 157 51.6
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 2.7e-35 152.9 186 48.9
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 7.8e-35 151.4 156 50.6
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.7e-34 150.2 131 55.0
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 2.3e-34 149.8 132 59.8
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 6.6e-34 148.3 108 63.0
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.5e-33 147.1 78 79.5
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 4.0e-31 139.0 119 55.5
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 6.9e-31 138.3 162 48.1
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 9.9e-30 134.4 111 51.4
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 2.2e-29 133.3 113 53.1
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.2e-28 129.4 153 50.3
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 5.4e-28 128.6 91 61.5
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.1e-27 126.7 85 67.1
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 1.8e-26 123.6 115 53.9
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 2.6e-22 109.8 209 39.7
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 5.8e-22 108.6 119 54.6
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 3.5e-19 99.4 72 59.7
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 2.5e-17 93.2 74 60.8
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.5e-17 93.2 131 48.1
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 4.3e-17 92.4 130 44.6
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.4e-15 87.4 128 46.1
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 1.2e-11 74.3 141 43.3
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 1.1e-09 67.8 121 37.2
Cre07.g339200 Chlamydomonas reinhardtii HOM05D007022 ORTHO05D008868 1.3e-08 64.3 97 32.0


User provided reference genes

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