Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 2.9e-70 268.5 137 100.0
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 5.0e-30 134.8 117 62.4
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.9e-29 132.9 108 66.7
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 6.1e-28 127.9 110 59.1
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.8e-27 126.3 110 58.2
Migut.F00892 Erythranthe guttata HOM05D009634 ORTHO05D009650 4.7e-20 101.7 117 52.1
Migut.F00891 Erythranthe guttata HOM05D009634 ORTHO05D009650 7.0e-16 87.8 115 47.0
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 3.5e-15 85.5 112 43.8
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 5.9e-15 84.7 103 47.6
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.7e-14 83.2 114 43.9
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 2.2e-14 82.8 137 42.3
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 5.0e-14 81.6 103 46.6
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 8.5e-14 80.9 114 43.0
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 1.5e-13 80.1 114 43.0
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 3.2e-13 79.0 113 42.5
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 4.2e-13 78.6 101 45.5
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 7.2e-13 77.8 103 45.6
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 2.1e-12 76.3 120 40.0
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.1e-12 76.3 105 44.8
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.7e-12 75.9 103 48.5
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 6.1e-12 74.7 103 43.7
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 4.4e-10 68.6 104 42.3
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 3.7e-09 65.5 100 44.0
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 1.6e-07 60.1 108 39.8
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 2.7e-07 59.3 117 39.3
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 4.5e-07 58.5 106 41.5
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 5.9e-07 58.2 110 38.2
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.0e-06 57.4 114 39.5
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 1.7e-06 56.6 108 38.0
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 2.9e-06 55.8 112 38.4
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 5.0e-06 55.1 108 38.0


User provided reference genes

Program Settings