Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 7.2e-110 402.1 588 100.0
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 9.6e-38 162.5 173 48.0
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 2.0e-35 154.8 179 49.7
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 2.9e-34 151.0 156 48.7
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 4.9e-34 150.2 160 48.1
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 1.9e-33 148.3 145 49.7
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.9e-33 148.3 157 49.0
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 2.4e-33 147.9 160 52.5
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 2.4e-33 147.9 154 51.3
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 7.1e-33 146.4 149 51.7
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 1.6e-32 145.2 157 48.4
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 2.7e-32 144.4 147 47.6
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.0e-31 142.5 147 45.6
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 1.0e-31 142.5 147 45.6
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.7e-31 141.7 149 50.3
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.7e-31 141.7 149 50.3
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 3.9e-31 140.6 145 49.0
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 6.6e-31 139.8 150 46.7
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 4.3e-30 137.1 158 46.8
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.6e-29 134.0 154 44.8
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 3.6e-29 134.0 151 46.4
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 2.4e-28 131.3 130 52.3
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 4.0e-28 130.6 174 43.7
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 4.0e-28 130.6 98 59.2
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 4.0e-28 130.6 145 49.7
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 5.3e-28 130.2 152 44.7
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 9.0e-28 129.4 121 48.8
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 9.0e-28 129.4 104 57.7
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 2.0e-27 128.3 170 41.2
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 2.6e-27 127.9 100 56.0
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 3.4e-27 127.5 172 43.0
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 3.4e-27 127.5 146 45.9
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 4.5e-27 127.1 118 51.7
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 4.5e-27 127.1 163 44.8
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 7.6e-27 126.3 156 43.6
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 9.9e-27 125.9 156 45.5
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 2.2e-26 124.8 161 42.9
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 2.2e-26 124.8 132 48.5
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 3.8e-26 124.0 101 56.4
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 4.9e-26 123.6 117 51.3
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.1e-25 122.5 117 51.3
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 4.2e-25 120.6 97 56.7
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 5.5e-25 120.2 145 44.8
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 2.7e-24 117.9 105 51.4
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 2.7e-24 117.9 105 51.4
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 6.0e-24 116.7 100 56.0
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 6.0e-24 116.7 149 45.6
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.3e-23 115.5 103 53.4
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 3.3e-22 110.9 142 41.5
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 1.6e-21 108.6 113 44.2
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 2.8e-21 107.8 76 64.5
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.4e-20 104.8 145 42.8
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 3.1e-20 104.4 157 38.9
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.5e-19 102.1 76 63.2
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 1.3e-18 99.0 98 52.0
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.2e-18 98.2 171 36.3
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.9e-18 97.8 155 37.4
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.9e-18 97.8 155 37.4
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 6.5e-18 96.7 164 36.0
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 8.4e-18 96.3 120 39.2
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 1.1e-17 95.9 154 35.7
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.1e-17 95.9 153 36.6
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.4e-17 95.5 154 35.7
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 7.1e-17 93.2 160 35.6
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 7.1e-17 93.2 173 34.1
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.2e-16 92.4 154 35.7
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 1.2e-16 92.4 175 36.0
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 1.3e-15 89.0 152 36.8
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 1.8e-15 88.6 131 41.2
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 3.0e-15 87.8 117 43.6
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 5.1e-15 87.0 151 35.8
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 6.7e-15 86.7 161 34.8
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 1.9e-14 85.1 66 57.6
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 3.3e-14 84.3 82 51.2
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 3.3e-14 84.3 171 32.2
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 4.3e-14 84.0 125 36.0
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 5.7e-14 83.6 181 33.1
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 9.6e-14 82.8 63 58.7
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 2.1e-13 81.6 63 58.7
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 2.4e-12 78.2 64 56.2
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 3.1e-12 77.8 78 47.4
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 9.0e-12 76.3 124 37.1
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 3.4e-11 74.3 105 37.1
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 5.9e-11 73.6 160 32.5
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 7.6e-11 73.2 116 32.8
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.0e-10 72.8 84 42.9
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 1.3e-10 72.4 105 37.1
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 3.8e-10 70.9 105 35.2
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 3.8e-10 70.9 84 41.7
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.5e-09 68.2 86 41.9
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.5e-09 68.2 80 46.2
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.5e-09 68.2 80 46.2
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.2e-09 67.8 98 41.8
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 4.2e-09 67.4 73 45.2
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 5.5e-09 67.0 58 53.4
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 4.6e-08 63.9 76 42.1
Lj2C43T6 Lonicera japonica HOM05D017878 ORTHO05D018225 1.0e-07 62.8 56 50.0
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.0e-07 61.2 79 43.0
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 5.1e-07 60.5 42 61.9
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 6.7e-07 60.1 42 59.5
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 8.7e-07 59.7 44 54.5
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.1e-06 59.3 117 32.5
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 1.1e-06 59.3 96 28.1
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 1.5e-06 58.9 92 34.8
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 1.5e-06 58.9 42 61.9
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 2.5e-06 58.2 104 26.9
HPP92_001276 Vanilla planifolia HOM05D002825 ORTHO05D003824 4.3e-06 57.4 90 32.2
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 5.7e-06 57.0 45 57.8


User provided reference genes

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