Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 7.1e-144 513.8 247 100.0
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 7.7e-98 360.9 250 69.6
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 3.8e-97 358.6 291 60.5
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.2e-93 347.1 245 67.3
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 2.9e-89 332.4 206 71.4
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.9e-88 329.7 238 64.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.0e-86 323.9 227 63.4
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 4.0e-86 322.0 240 62.1
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 6.8e-86 321.2 241 63.1
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 6.8e-86 321.2 241 62.7
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 8.8e-86 320.9 238 63.0
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.2e-85 320.5 241 62.7
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.5e-85 320.1 221 65.2
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.5e-85 320.1 216 66.7
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 1.5e-85 320.1 232 63.8
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 2.6e-85 319.3 201 71.6
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 7.5e-85 317.8 231 64.5
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 9.8e-85 317.4 226 66.4
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.7e-84 316.6 238 60.5
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.7e-84 316.6 195 70.3
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 2.2e-84 316.2 240 61.7
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.2e-84 316.2 202 71.3
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.7e-84 315.5 226 65.0
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 3.7e-84 315.5 230 63.0
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 4.9e-84 315.1 221 65.6
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 8.3e-84 314.3 250 59.2
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.8e-83 313.2 215 64.7
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 3.1e-83 312.4 229 62.4
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 4.1e-83 312.0 214 67.3
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 5.4e-83 311.6 238 62.2
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 5.4e-83 311.6 199 68.8
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 5.4e-83 311.6 202 68.8
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 5.4e-83 311.6 235 60.9
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 7.0e-83 311.2 230 62.2
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 9.1e-83 310.8 204 67.6
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 9.1e-83 310.8 204 67.6
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 9.1e-83 310.8 237 59.9
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.2e-82 310.5 229 62.0
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 2.0e-82 309.7 191 70.2
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 2.0e-82 309.7 229 62.4
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 2.7e-82 309.3 197 69.0
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 3.5e-82 308.9 220 65.0
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 5.9e-82 308.1 212 64.6
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 5.9e-82 308.1 220 64.1
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.0e-81 307.4 201 67.2
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 1.0e-81 307.4 203 66.5
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 1.3e-81 307.0 232 62.1
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 2.3e-81 306.2 203 66.5
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 8.6e-81 304.3 222 61.3
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 3.3e-80 302.4 225 63.1
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 3.3e-80 302.4 237 58.6
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 7.2e-80 301.2 198 70.2
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 7.2e-80 301.2 236 58.5
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 9.5e-80 300.8 240 58.8
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.6e-79 300.1 247 57.9
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 2.8e-79 299.3 222 61.7
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 2.8e-79 299.3 206 67.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 3.6e-79 298.9 247 57.5
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 2.0e-77 293.1 225 60.0
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 2.0e-77 293.1 225 59.6
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 2.0e-77 293.1 225 59.6
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 3.4e-77 292.4 197 65.5
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 3.4e-77 292.4 202 64.4
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.5e-77 291.2 225 61.3
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.7e-76 290.0 201 63.2
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 2.9e-76 289.3 199 66.3
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 4.9e-76 288.5 218 60.1
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 8.3e-76 287.7 227 59.9
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.1e-75 287.3 202 64.9
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.4e-75 287.0 199 63.8
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.8e-75 286.6 170 72.9
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 5.4e-75 285.0 248 54.8
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 7.0e-75 284.6 216 58.8
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 9.2e-75 284.3 199 62.3
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.2e-74 283.9 222 60.8
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 2.0e-74 283.1 197 64.0
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 8.6e-73 277.7 193 65.8
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 1.9e-72 276.6 205 65.4
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 2.5e-72 276.2 238 54.6
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 4.0e-70 268.9 169 68.0
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.6e-69 266.2 292 50.3
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 4.4e-69 265.4 190 64.2
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 3.2e-67 259.2 217 56.2
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 7.0e-67 258.1 183 66.1
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.6e-66 256.9 171 67.8
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 3.0e-65 252.7 166 65.7
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.5e-64 250.4 237 50.6
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 9.5e-64 247.7 200 57.5
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 2.8e-63 246.1 237 54.4
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 8.1e-63 244.6 223 49.8
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 2.3e-62 243.0 201 56.7
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 3.7e-60 235.7 132 77.3
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 8.3e-60 234.6 201 58.7
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.6e-58 230.3 166 66.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.9e-56 223.4 171 61.4
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 1.4e-54 217.2 163 61.3
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 2.5e-48 196.4 200 47.0
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 3.4e-45 186.0 124 66.9
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.3e-44 184.1 238 44.5
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.0e-41 174.5 119 63.0
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 2.5e-40 169.9 224 41.5
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 4.3e-40 169.1 102 69.6
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 4.8e-39 165.6 182 44.0
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 3.2e-35 152.9 145 50.3
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.4e-30 136.7 80 75.0
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 2.0e-29 133.7 90 62.2
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.5e-24 116.7 85 58.8
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 5.5e-19 99.0 60 73.3
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.3e-17 94.4 57 71.9
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.5e-16 90.9 55 72.7
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 5.7e-16 89.0 66 54.5
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 9.6e-16 88.2 67 56.7
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.4e-14 84.3 94 48.9
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 1.0e-12 78.2 66 53.0
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 7.2e-11 72.0 92 43.5
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 7.2e-11 72.0 92 43.5
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 5.1e-09 65.9 42 64.3
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 5.1e-09 65.9 42 64.3
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.5e-08 64.3 41 63.4
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.5e-08 64.3 72 43.1
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 3.7e-07 59.7 33 75.8
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 4.1e-06 56.2 91 31.9


User provided reference genes

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