Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 2.4e-175 618.6 293 100.0
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 8.2e-115 417.5 272 71.7
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 5.9e-113 411.4 288 67.0
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 1.5e-111 406.8 272 69.9
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 3.8e-104 382.1 288 62.2
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 7.2e-103 377.9 271 65.7
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 3.6e-102 375.6 270 64.4
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.8e-101 373.2 271 65.3
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 3.4e-100 369.0 277 62.8
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 8.3e-99 364.4 271 63.1
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 1.4e-98 363.6 261 65.1
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 2.0e-97 359.8 276 60.9
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 3.5e-97 359.0 271 63.5
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 5.9e-97 358.2 274 60.9
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.0e-96 357.5 274 62.0
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 1.7e-96 356.7 271 62.4
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 1.7e-96 356.7 270 61.5
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 2.3e-96 356.3 278 60.8
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 2.9e-96 355.9 271 61.6
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 5.0e-96 355.1 270 62.2
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 4.2e-95 352.1 269 62.1
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 5.5e-95 351.7 271 60.9
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.2e-94 350.5 281 59.4
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 1.2e-94 350.5 281 58.0
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.8e-94 349.4 281 59.1
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 1.8e-93 346.7 275 59.6
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 4.0e-93 345.5 275 58.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 5.2e-93 345.1 271 58.3
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 1.5e-92 343.6 277 59.9
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 4.4e-92 342.0 271 59.8
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 7.5e-92 341.3 271 59.4
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 9.8e-92 340.9 284 58.1
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.7e-91 340.1 271 59.4
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 1.7e-91 340.1 272 58.8
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 8.3e-91 337.8 271 59.0
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 1.4e-90 337.0 271 59.4
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 2.4e-90 336.3 269 57.6
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 7.0e-90 334.7 272 57.7
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 9.2e-90 334.3 275 55.6
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 2.0e-89 333.2 271 59.0
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 5.9e-89 331.6 292 55.5
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 2.9e-88 329.3 271 58.3
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 3.9e-88 328.9 271 56.1
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 5.6e-87 325.1 271 56.8
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 5.6e-87 325.1 271 57.6
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 9.5e-87 324.3 267 58.4
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 9.5e-87 324.3 280 57.5
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 1.2e-86 323.9 271 57.2
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.6e-86 323.6 274 56.2
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 2.1e-86 323.2 267 58.1
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 4.7e-86 322.0 227 66.5
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 2.3e-85 319.7 267 57.7
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 5.2e-85 318.5 271 57.2
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 8.3e-83 311.2 271 55.4
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 8.3e-83 311.2 271 55.4
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 1.9e-82 310.1 271 55.0
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 8.6e-80 301.2 289 52.9
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 1.5e-79 300.4 276 52.2
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 1.5e-79 300.4 224 60.7
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 3.3e-79 299.3 224 63.4
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 5.6e-79 298.5 275 54.2
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 2.8e-78 296.2 284 51.8
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 1.1e-77 294.3 233 60.5
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 6.8e-77 291.6 271 52.0
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.4e-76 288.9 271 50.9
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 1.7e-75 287.0 302 48.3
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.9e-75 286.2 266 50.8
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 7.0e-74 281.6 271 52.0
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 2.1e-73 280.0 313 46.6
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 6.0e-73 278.5 266 50.0
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.1e-69 266.2 271 49.8
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 3.1e-69 266.2 272 47.8
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.0e-68 263.5 283 48.1
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 7.5e-68 261.5 229 53.7
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 2.9e-67 259.6 170 73.5
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 4.6e-65 252.3 231 50.2
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 3.3e-63 246.1 176 67.0
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 5.2e-61 238.8 328 40.9
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 2.0e-60 236.9 276 42.0
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 4.9e-59 232.3 188 58.5
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 3.0e-56 223.0 184 54.9
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 3.3e-55 219.5 276 40.2
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 3.3e-55 219.5 164 65.9
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 7.3e-55 218.4 179 58.1
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 4.8e-54 215.7 186 55.4
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 1.2e-49 201.1 272 41.5
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 1.6e-49 200.7 271 40.2
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 1.6e-49 200.7 249 42.6
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 2.9e-43 179.9 280 34.6
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.0e-40 169.9 133 57.9
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.9e-39 167.2 146 51.4
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.0e-35 154.8 109 62.4
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.9e-34 150.6 310 32.3
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.5e-34 150.2 130 58.5
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 6.0e-33 145.6 147 53.1
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.3e-27 127.9 84 71.4
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 1.2e-20 104.8 74 66.2
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 2.6e-20 103.6 171 34.5
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.4e-18 97.8 117 38.5
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.6e-09 66.6 38 68.4
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 1.0e-08 65.1 258 25.2
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 3.9e-08 63.2 263 23.6
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 3.9e-08 63.2 80 40.0
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 6.7e-08 62.4 176 26.1
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.6e-07 60.5 39 66.7
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 3.3e-07 60.1 263 24.7
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 3.3e-07 60.1 261 22.6
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 5.7e-07 59.3 240 26.2
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 1.7e-06 57.8 191 24.1
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 1.7e-06 57.8 262 24.0
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 1.7e-06 57.8 224 25.9


User provided reference genes

Program Settings