Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 0.0e+00 1245.3 608 100.0
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 1.7e-268 929.1 516 85.5
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.5e-267 926.0 516 84.7
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 5.0e-223 778.1 541 69.9
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 6.1e-221 771.2 527 70.0
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 5.7e-219 764.6 521 71.2
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.3e-217 758.1 521 69.5
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 9.1e-217 757.3 528 69.1
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 2.0e-216 756.1 522 70.5
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.0e-215 751.5 522 69.2
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.6e-213 746.5 527 67.7
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 4.7e-213 745.0 527 67.6
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 8.0e-213 744.2 547 66.0
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 1.4e-212 743.4 527 68.5
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 8.8e-212 740.7 527 67.4
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.2e-211 740.3 526 66.9
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 9.7e-211 737.3 527 67.2
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 1.3e-210 736.9 526 66.7
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 3.7e-210 735.3 526 67.3
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.4e-209 733.4 526 66.9
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.8e-209 733.0 521 67.6
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.8e-209 733.0 543 68.1
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 5.3e-209 731.5 528 66.9
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.2e-208 730.3 527 68.5
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 5.9e-208 728.0 529 66.7
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 7.7e-208 727.6 529 67.3
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 7.7e-208 727.6 526 66.0
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.7e-207 726.5 548 66.4
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 2.2e-207 726.1 529 67.1
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 6.5e-207 724.5 526 66.9
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.1e-206 723.8 529 66.7
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 5.5e-206 721.5 526 66.5
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 9.4e-206 720.7 526 67.3
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 1.2e-205 720.3 528 65.2
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 1.6e-205 719.9 528 64.6
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 8.0e-205 717.6 528 65.3
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 2.0e-203 713.0 528 66.1
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 2.6e-203 712.6 522 66.3
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 6.3e-202 708.0 528 64.2
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.5e-200 701.8 580 61.4
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 1.0e-199 700.7 548 62.6
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 8.6e-199 697.6 521 66.0
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.5e-198 696.8 564 61.0
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 4.2e-198 695.3 527 63.8
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 2.1e-197 693.0 525 64.2
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 6.1e-197 691.4 526 63.1
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 3.0e-196 689.1 503 65.4
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 4.0e-196 688.7 545 61.5
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 5.2e-196 688.3 530 62.6
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 2.0e-195 686.4 529 62.6
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 4.4e-195 685.3 526 62.2
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 4.1e-193 678.7 605 57.4
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 2.7e-192 676.0 526 62.2
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.7e-191 673.3 527 61.9
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 2.3e-191 672.9 526 61.8
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 2.3e-191 672.9 526 62.2
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 2.9e-191 672.5 526 61.6
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 3.3e-190 669.1 553 59.9
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 2.1e-189 666.4 527 60.2
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 8.0e-189 664.5 545 59.1
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 1.4e-188 663.7 527 60.0
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 2.0e-187 659.8 559 58.9
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 7.5e-187 657.9 525 61.0
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 6.4e-186 654.8 542 59.6
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 3.9e-183 645.6 525 60.4
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.1e-182 644.0 524 60.3
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 4.3e-182 642.1 547 61.1
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 2.8e-181 639.4 519 62.0
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 6.2e-181 638.3 530 58.1
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 5.2e-180 635.2 528 59.3
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.5e-179 633.6 528 59.3
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 6.4e-178 628.2 526 59.3
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 3.9e-175 619.0 522 59.0
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.9e-175 619.0 475 64.4
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 1.5e-171 607.1 522 56.5
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 7.5e-171 604.7 529 57.8
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 2.9e-170 602.8 521 57.6
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 1.2e-160 570.9 679 46.8
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.0e-159 567.8 494 58.7
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 1.1e-158 564.3 421 64.8
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 8.1e-157 558.1 537 54.2
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 4.0e-156 555.8 420 63.8
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 4.4e-155 552.4 532 51.7
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 2.2e-154 550.1 537 54.0
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 6.4e-154 548.5 545 51.0
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 9.3e-153 544.7 532 52.1
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.3e-151 540.8 420 63.3
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 3.4e-147 526.2 523 52.8
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 7.6e-147 525.0 479 56.4
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 1.1e-140 504.6 312 77.6
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 3.8e-138 496.1 406 61.3
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 3.2e-105 386.7 342 55.0
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 2.1e-104 384.0 263 66.9
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 8.8e-103 378.6 264 64.8
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 1.4e-100 371.3 566 39.2
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 1.8e-100 370.9 317 58.7
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 5.3e-100 369.4 319 56.7
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 6.7e-95 352.4 407 47.7
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.3e-93 348.2 259 64.5
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 2.2e-93 347.4 550 35.3
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 1.1e-89 335.1 258 64.3
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.1e-76 292.0 251 58.2
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 1.6e-75 288.1 269 53.9
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 2.9e-74 283.9 281 52.3
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 7.5e-62 242.7 234 52.6
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 6.6e-58 229.6 204 56.9
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 1.5e-57 228.4 685 27.4
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 2.0e-54 218.0 167 61.7
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 2.6e-54 217.6 193 53.9
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 2.9e-53 214.2 167 62.9
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 7.1e-52 209.5 140 67.1
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 8.1e-48 196.1 181 53.6
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 7.6e-46 189.5 180 55.0
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 1.1e-44 185.7 114 76.3
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 4.4e-38 163.7 183 50.8
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 2.2e-29 134.8 145 49.0
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 2.1e-24 118.2 97 56.7
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 5.8e-22 110.2 144 48.6
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 1.1e-12 79.3 49 71.4
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 9.3e-12 76.3 91 41.8
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 2.7e-11 74.7 46 69.6
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 6.7e-10 70.1 89 46.1
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 1.5e-09 68.9 85 43.5


User provided reference genes

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