Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.3e-177 626.3 319 100.0
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.7e-121 439.9 304 74.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.2e-119 433.7 304 74.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.2e-119 433.7 304 74.3
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 3.9e-118 428.7 304 72.0
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.5e-117 426.0 291 74.9
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.6e-117 424.1 291 74.6
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 3.6e-116 422.2 307 71.7
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.4e-115 420.2 304 71.4
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-115 419.9 301 71.4
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.8e-115 419.9 301 71.4
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 3.1e-115 419.1 301 71.1
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 4.0e-115 418.7 305 70.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.3e-115 418.3 301 71.1
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 5.3e-115 418.3 301 71.1
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 9.0e-115 417.5 304 70.1
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.5e-114 416.8 304 70.4
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.5e-114 416.8 301 70.8
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 2.0e-114 416.4 294 71.4
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.0e-114 416.4 294 72.1
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 2.6e-114 416.0 293 73.7
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.6e-114 416.0 304 70.4
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 3.4e-114 415.6 295 71.5
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 3.4e-114 415.6 305 70.5
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 4.4e-114 415.2 304 70.7
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 5.8e-114 414.8 294 72.8
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 7.6e-114 414.5 293 71.7
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 9.9e-114 414.1 301 70.4
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.3e-113 413.7 294 72.1
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.3e-113 413.7 293 72.0
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.3e-113 413.7 294 72.4
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.7e-113 413.3 304 69.1
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.7e-113 413.3 301 71.1
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.8e-113 412.1 304 71.4
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 6.4e-113 411.4 304 69.4
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 6.4e-113 411.4 295 70.2
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.1e-112 410.6 304 69.1
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.4e-112 410.2 293 72.0
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.9e-112 409.8 293 71.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 3.2e-112 409.1 294 70.4
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.2e-112 408.7 301 69.8
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 4.2e-112 408.7 304 69.4
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 5.4e-112 408.3 303 68.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 7.1e-112 407.9 302 68.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.2e-111 407.1 294 70.4
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.7e-111 406.0 293 71.0
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.7e-111 406.0 305 68.5
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 3.5e-111 405.6 293 70.6
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 3.5e-111 405.6 304 68.1
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 6.0e-111 404.8 304 66.8
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 6.0e-111 404.8 290 71.4
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.0e-110 404.1 304 69.4
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.7e-110 403.3 304 68.1
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.7e-110 403.3 304 70.4
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.3e-110 402.9 294 69.4
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 3.0e-110 402.5 294 68.7
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 3.9e-110 402.1 294 68.7
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 8.7e-110 401.0 289 71.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 8.7e-110 401.0 304 67.8
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 8.7e-110 401.0 301 69.1
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.1e-109 400.6 304 68.4
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 7.3e-109 397.9 308 65.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 7.3e-109 397.9 308 65.9
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 7.3e-109 397.9 301 67.8
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 4.8e-108 395.2 304 67.4
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 8.1e-108 394.4 294 69.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.4e-107 393.7 306 64.7
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-107 393.7 294 67.7
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.8e-107 393.3 304 67.1
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 4.0e-107 392.1 306 65.4
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 9.9e-106 387.5 306 65.0
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 9.9e-106 387.5 306 65.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.3e-105 387.1 306 65.0
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.2e-105 386.3 307 65.1
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.9e-105 386.0 306 64.4
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 4.9e-105 385.2 306 64.4
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 6.4e-105 384.8 307 65.1
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 6.4e-105 384.8 306 64.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 8.4e-105 384.4 319 64.9
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.4e-104 383.6 304 65.8
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 5.4e-104 381.7 303 65.0
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 7.1e-104 381.3 303 65.0
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 9.3e-104 380.9 304 64.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 9.3e-104 380.9 306 64.4
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.5e-101 373.6 268 71.6
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 3.7e-100 369.0 257 74.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 7.6e-98 361.3 307 61.2
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 3.2e-96 355.9 292 62.3
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 5.5e-96 355.1 292 63.0
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.0e-94 350.9 294 61.9
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.1e-93 347.4 265 65.7
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.3e-89 334.0 304 57.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.9e-89 332.8 270 64.8
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.9e-85 320.1 246 66.3
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 9.0e-83 311.2 276 59.4
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.0e-82 310.1 304 53.0
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 5.0e-81 305.4 290 54.5
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.1e-79 300.1 266 59.4
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 8.8e-78 294.7 236 63.6
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.1e-75 286.2 201 71.1
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 2.6e-74 283.1 303 54.8
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 3.4e-74 282.7 290 52.8
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.4e-72 277.3 298 50.3
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.2e-66 257.7 209 63.2
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 4.5e-66 255.8 297 49.2
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.8e-60 235.7 289 48.1
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 2.2e-57 226.9 312 44.2
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.0e-46 189.5 222 49.1
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.2e-45 188.0 304 40.5
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-45 187.2 160 63.8
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.4e-43 180.3 159 64.2
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.7e-42 175.3 159 61.6
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.8e-39 166.8 115 69.6
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-37 161.4 156 59.6
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 3.4e-37 159.8 173 47.4
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.3e-36 155.2 81 86.4
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 3.0e-33 146.7 298 36.9
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.2e-31 141.4 306 34.3
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 6.2e-31 139.0 342 30.7
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 8.3e-28 128.6 276 34.8
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.2e-27 126.7 349 29.2
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.3e-16 90.1 71 63.4
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 9.9e-13 78.6 43 83.7


User provided reference genes

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