Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06398 Striga asiatica HOM05D000118 ORTHO05D401955 3.5e-91 338.2 163 100.0
SGA_v2.0_scaffold79G25530 Striga asiatica HOM05D000118 ORTHO05D000872 2.1e-19 99.8 49 95.9
SalBow3G4138 Salvia bowleyana HOM05D000118 ORTHO05D000872 3.1e-10 69.3 62 54.8
TWI31G1061 Tripterygium wilfordii HOM05D000118 ORTHO05D000872 1.3e-08 63.9 82 37.8
Lalb_Chr13g0290931 Lupinus albus HOM05D000118 ORTHO05D000872 4.9e-08 62.0 66 45.5
CiPaw.14G134500 Carya illinoinensis HOM05D000118 ORTHO05D000872 6.4e-08 61.6 62 48.4
Cfa009595 Carpinus fangiana HOM05D000118 ORTHO05D000872 8.3e-08 61.2 62 43.5
TWI31G0356 Tripterygium wilfordii HOM05D000118 ORTHO05D000872 1.1e-07 60.8 48 56.2
TWI31G1111 Tripterygium wilfordii HOM05D000118 ORTHO05D000872 1.1e-07 60.8 48 56.2
Cc11_g06860 Coffea canephora HOM05D000118 ORTHO05D000872 1.4e-07 60.5 62 50.0
CiPaw.13G146800 Carya illinoinensis HOM05D000118 ORTHO05D000872 2.4e-07 59.7 62 46.8
Oeu032060.1 Olea europaea HOM05D000118 ORTHO05D000872 3.2e-07 59.3 88 39.8
COL.COLO4_14993 Corchorus olitorius HOM05D000118 ORTHO05D000872 4.1e-07 58.9 62 48.4
COL.COLO4_14994 Corchorus olitorius HOM05D000118 ORTHO05D000872 4.1e-07 58.9 62 48.4
Lj3g0011869 Lotus japonicus HOM05D000118 ORTHO05D000872 4.1e-07 58.9 62 46.8
SGA_v2.0_scaffold309G48129 Striga asiatica HOM05D000118 ORTHO05D000872 4.1e-07 58.9 52 48.1
Gohir.D13G160400 Gossypium hirsutum HOM05D000118 ORTHO05D000872 5.4e-07 58.5 62 46.8
Lj1A546G22 Lonicera japonica HOM05D000118 ORTHO05D000872 5.4e-07 58.5 62 45.2
TAR623G0381 Trochodendron aralioides HOM05D000118 ORTHO05D000872 5.4e-07 58.5 62 41.9
Duzib128G1846 Durio zibethinus HOM05D000118 ORTHO05D000872 7.1e-07 58.2 62 45.2
CiPaw.13G146900 Carya illinoinensis HOM05D000118 ORTHO05D000872 9.2e-07 57.8 45 60.0
COL.COLO4_33171 Corchorus olitorius HOM05D000118 ORTHO05D000872 9.2e-07 57.8 62 45.2
Lj1A542T44 Lonicera japonica HOM05D000118 ORTHO05D000872 9.2e-07 57.8 62 43.5
Ciclev10015715m.g Citrus clementina HOM05D000118 ORTHO05D000872 1.2e-06 57.4 78 39.7
COL.COLO4_33173 Corchorus olitorius HOM05D000118 ORTHO05D000872 1.2e-06 57.4 62 45.2
Gohir.A13G155700 Gossypium hirsutum HOM05D000118 ORTHO05D000872 1.2e-06 57.4 62 45.2
TAR369G0329 Trochodendron aralioides HOM05D000118 ORTHO05D000872 1.2e-06 57.4 62 40.3
Cc01_g02680 Coffea canephora HOM05D000118 ORTHO05D000872 1.6e-06 57.0 48 47.9
COL.COLO4_11821 Corchorus olitorius HOM05D000118 ORTHO05D000872 1.6e-06 57.0 62 45.2
Duzib128G1677 Durio zibethinus HOM05D000118 ORTHO05D000872 1.6e-06 57.0 62 43.5
Gohir.A13G155600 Gossypium hirsutum HOM05D000118 ORTHO05D000872 1.6e-06 57.0 62 45.2
Potri.001G006800 Populus trichocarpa HOM05D000118 ORTHO05D000872 1.6e-06 57.0 62 41.9
Potri.001G006901 Populus trichocarpa HOM05D000118 ORTHO05D000872 1.6e-06 57.0 62 41.9
Cc01_g07290 Coffea canephora HOM05D000118 ORTHO05D000872 2.1e-06 56.6 62 45.2
Duzib128G0750 Durio zibethinus HOM05D000118 ORTHO05D000872 2.1e-06 56.6 62 43.5
Gorai.013G181100 Gossypium raimondii HOM05D000118 ORTHO05D000872 2.1e-06 56.6 62 45.2
QL01p008253 Quercus lobata HOM05D000118 ORTHO05D000872 2.1e-06 56.6 62 43.5
QL01p008285 Quercus lobata HOM05D000118 ORTHO05D000872 2.1e-06 56.6 62 43.5
TAR623G0669 Trochodendron aralioides HOM05D000118 ORTHO05D000872 2.1e-06 56.6 62 40.3
Atru.chr3.2356 Acer truncatum HOM05D000118 ORTHO05D000872 2.7e-06 56.2 62 45.2
Atru.chr7.459 Acer truncatum HOM05D000118 ORTHO05D000872 2.7e-06 56.2 62 43.5
Cc00_g13580 Coffea canephora HOM05D000118 ORTHO05D000872 2.7e-06 56.2 48 47.9
Duzib177G0509 Durio zibethinus HOM05D000118 ORTHO05D000872 2.7e-06 56.2 62 43.5
Lj1A545T67 Lonicera japonica HOM05D000118 ORTHO05D000872 2.7e-06 56.2 62 41.9
QL01p008250 Quercus lobata HOM05D000118 ORTHO05D000872 3.5e-06 55.8 62 41.9
QL01p008343 Quercus lobata HOM05D000118 ORTHO05D000872 3.5e-06 55.8 62 41.9
QL01p008411 Quercus lobata HOM05D000118 ORTHO05D000872 3.5e-06 55.8 62 41.9
Gohir.D13G160600 Gossypium hirsutum HOM05D000118 ORTHO05D000872 4.6e-06 55.5 62 43.5
Gorai.013G181300 Gossypium raimondii HOM05D000118 ORTHO05D000872 4.6e-06 55.5 62 43.5
HanXRQChr11g0342641 Helianthus annuus HOM05D000118 ORTHO05D000872 4.6e-06 55.5 77 39.0
QL01p008353 Quercus lobata HOM05D000118 ORTHO05D000872 4.6e-06 55.5 62 41.9
Sabra01G0005100 Salix brachista HOM05D000118 ORTHO05D000872 4.6e-06 55.5 62 40.3
Atru.chr12.1365 Acer truncatum HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 43.5
Atru.chr3.2358 Acer truncatum HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 45.2
Duzib128G1960 Durio zibethinus HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 41.9
Lj1A544G35 Lonicera japonica HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 41.9
Lj1C547G5 Lonicera japonica HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 41.9
Manes.01G177000 Manihot esculenta HOM05D000118 ORTHO05D000872 6.0e-06 55.1 48 54.2
Solyc11g072100.2 Solanum lycopersicum HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 40.3
TAR623G1203 Trochodendron aralioides HOM05D000118 ORTHO05D000872 6.0e-06 55.1 62 38.7
Atru.chr4.3085 Acer truncatum HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 45.2
Cc01_g02690 Coffea canephora HOM05D000118 ORTHO05D000872 7.8e-06 54.7 48 45.8
Gohir.A13G155500 Gossypium hirsutum HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 43.5
Nitab4.5_0000254g0050 Nicotiana tabacum HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 43.5
Nitab4.5_0002567g0170 Nicotiana tabacum HOM05D000118 ORTHO05D000872 7.8e-06 54.7 58 44.8
QL01p008366 Quercus lobata HOM05D000118 ORTHO05D000872 7.8e-06 54.7 63 42.9
Sabra01G0005300 Salix brachista HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 40.3
PGSC0003DMG400027396 Solanum tuberosum HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 41.9
PGSC0003DMG400029028 Solanum tuberosum HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 45.2
TWI60G0217 Tripterygium wilfordii HOM05D000118 ORTHO05D000872 7.8e-06 54.7 62 38.7


User provided reference genes

Program Settings