Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06387 Striga asiatica HOM05D000197 ORTHO05D000114 2.7e-77 292.0 150 100.0
SalBow7G2804 Salvia bowleyana HOM05D000197 ORTHO05D000114 1.8e-17 93.2 145 32.4
SGA_v2.0_scaffold13G06388 Striga asiatica HOM05D000197 ORTHO05D000114 1.1e-14 84.0 145 29.7
TAR369G1071 Trochodendron aralioides HOM05D000197 ORTHO05D000114 1.0e-12 77.4 149 34.9
Dinv14888 Davidia involucrata HOM05D000197 ORTHO05D000114 1.8e-09 66.6 152 30.9
Manes.15G130000 Manihot esculenta HOM05D000197 ORTHO05D000114 9.1e-09 64.3 127 28.3
CsaV3_3G021490 Cucumis sativus L. HOM05D000197 ORTHO05D000114 4.5e-08 62.0 138 27.5
FvH4_3g29530 Fragaria vesca HOM05D000197 ORTHO05D000114 5.9e-08 61.6 152 29.6
Eucgr.G02178 Eucalyptus grandis HOM05D000197 ORTHO05D000114 7.7e-08 61.2 129 28.7
PSO478G2835 Papaver somniferum HOM05D000197 ORTHO05D000114 1.0e-07 60.8 136 30.1
Thecc.02G285300 Theobroma cacao HOM05D000197 ORTHO05D000114 1.3e-07 60.5 125 29.6
SGA_v2.0_scaffold149G36499 Striga asiatica HOM05D000197 ORTHO05D000114 1.7e-07 60.1 117 29.9
Duzib251G0755 Durio zibethinus HOM05D000197 ORTHO05D000114 2.2e-07 59.7 125 32.0
FvH4_3g29540 Fragaria vesca HOM05D000197 ORTHO05D000114 2.2e-07 59.7 153 30.7
COL.COLO4_13140 Corchorus olitorius HOM05D000197 ORTHO05D000114 3.8e-07 58.9 89 37.1
Oeu024639.1 Olea europaea HOM05D000197 ORTHO05D000114 3.8e-07 58.9 118 27.1
COL.COLO4_13135 Corchorus olitorius HOM05D000197 ORTHO05D000114 6.5e-07 58.2 133 27.8
CsaV3_3G021460 Cucumis sativus L. HOM05D000197 ORTHO05D000114 8.5e-07 57.8 150 30.7
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 8.5e-07 57.8 150 26.0
SalBow3G2212 Salvia bowleyana HOM05D000197 ORTHO05D000114 8.5e-07 57.8 118 27.1
Hma1.2p1_0490F.1_g164300 Hydrangea macrophylla HOM05D000197 ORTHO05D000114 2.5e-06 56.2 127 27.6
Sed0008579 Sechium edule HOM05D000197 ORTHO05D000114 2.5e-06 56.2 134 24.6
PGR083G1993 Punica granatum HOM05D000197 ORTHO05D000114 3.2e-06 55.8 145 25.5
arahy.Tifrunner.gnm1.ann1.9J64GE Arachis hypogaea HOM05D000197 ORTHO05D000114 5.5e-06 55.1 148 27.7
Haze_14268 Corylus avellana HOM05D000197 ORTHO05D000114 7.2e-06 54.7 150 24.7
ClCG05G011140 Citrullus lanatus HOM05D000197 ORTHO05D000114 9.4e-06 54.3 151 28.5
COL.COLO4_13136 Corchorus olitorius HOM05D000197 ORTHO05D000114 9.4e-06 54.3 129 30.2
RcHm_v2.0_Chr4g0441741 Rosa chinensis HOM05D000197 ORTHO05D000114 9.4e-06 54.3 150 26.0


User provided reference genes

Program Settings