Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 3.8e-182 641.3 319 100.0
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 6.6e-126 454.5 302 76.2
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 9.6e-125 450.7 305 74.4
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 1.5e-122 443.4 302 74.2
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 9.9e-122 440.7 289 75.8
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 3.2e-120 435.6 301 75.1
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 3.9e-118 428.7 292 74.0
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 1.3e-116 423.7 308 71.1
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 6.9e-115 417.9 308 69.8
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 2.0e-114 416.4 312 72.1
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 3.4e-114 415.6 300 72.7
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 2.9e-113 412.5 266 78.2
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 3.8e-113 412.1 291 71.1
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 4.9e-113 411.8 298 70.5
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 2.4e-112 409.5 300 70.0
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 2.4e-112 409.5 302 70.5
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 3.2e-112 409.1 274 74.8
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 7.1e-112 407.9 296 70.3
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 7.1e-112 407.9 301 70.8
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 9.3e-112 407.5 308 68.2
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 1.2e-111 407.1 301 69.4
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 2.7e-111 406.0 311 67.8
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 3.5e-111 405.6 311 66.9
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 4.6e-111 405.2 291 70.8
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 4.6e-111 405.2 300 69.0
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 4.6e-111 405.2 316 67.4
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 6.0e-111 404.8 311 68.5
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 1.0e-110 404.1 259 78.8
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 6.6e-110 401.4 289 70.6
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 1.9e-109 399.8 306 67.0
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 2.5e-109 399.4 263 73.0
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 1.3e-108 397.1 303 66.7
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.8e-108 396.0 306 66.3
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 2.8e-108 396.0 313 67.4
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 3.6e-108 395.6 310 66.1
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 1.1e-107 394.0 301 69.1
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.4e-107 393.7 295 67.8
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 1.4e-107 393.7 295 67.8
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.4e-107 392.9 313 65.5
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 4.0e-107 392.1 297 67.3
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.5e-106 390.2 313 65.2
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 4.5e-106 388.7 255 75.7
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 1.3e-105 387.1 304 66.8
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 1.7e-105 386.7 297 67.7
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 2.2e-105 386.3 276 72.5
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 3.8e-105 385.6 258 74.8
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 6.4e-105 384.8 254 74.4
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 5.4e-104 381.7 267 71.9
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 7.1e-104 381.3 303 65.3
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 7.1e-104 381.3 219 82.6
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 9.3e-104 380.9 272 71.7
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 9.3e-104 380.9 231 77.1
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 9.3e-104 380.9 326 61.7
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 9.3e-104 380.9 291 64.9
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 2.1e-103 379.8 285 67.4
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 2.7e-103 379.4 301 66.8
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 3.5e-103 379.0 310 63.9
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 4.6e-103 378.6 301 64.8
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 6.0e-103 378.3 280 68.9
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 6.0e-103 378.3 297 65.0
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 6.0e-103 378.3 284 67.3
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 7.9e-103 377.9 300 65.3
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 7.9e-103 377.9 288 67.0
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 7.9e-103 377.9 310 63.9
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 1.0e-102 377.5 310 65.5
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 1.3e-102 377.1 293 65.5
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 1.8e-102 376.7 298 64.4
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 2.3e-102 376.3 275 70.9
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 2.3e-102 376.3 300 66.7
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 1.5e-101 373.6 296 64.5
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 1.9e-101 373.2 282 66.7
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 3.3e-101 372.5 291 66.0
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 3.3e-101 372.5 291 66.0
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 3.3e-101 372.5 269 68.4
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 5.6e-101 371.7 283 67.5
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 5.6e-101 371.7 348 60.1
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 9.6e-101 370.9 260 71.2
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 9.6e-101 370.9 260 71.2
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 2.8e-100 369.4 272 66.5
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 2.4e-99 366.3 222 79.7
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 4.0e-99 365.5 301 64.1
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 3.4e-98 362.5 280 64.3
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 4.5e-98 362.1 250 70.0
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 4.9e-97 358.6 219 79.5
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 6.5e-97 358.2 252 69.0
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 6.5e-97 358.2 256 72.3
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 1.4e-96 357.1 264 68.2
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 2.5e-96 356.3 310 59.4
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 1.6e-95 353.6 261 68.2
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 3.1e-91 339.3 284 63.0
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 7.9e-87 324.7 222 74.3
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.0e-86 324.3 193 77.7
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 4.3e-85 318.9 261 60.2
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 1.4e-83 313.9 304 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 1.7e-76 290.4 262 54.6
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 7.2e-72 275.0 163 80.4
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 9.4e-72 274.6 307 52.8
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 3.0e-70 269.6 254 53.1
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 4.4e-69 265.8 218 61.9
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 1.2e-63 247.7 273 48.4
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 1.8e-62 243.8 137 81.8
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 1.6e-55 220.7 185 52.4
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 3.0e-54 216.5 132 81.8
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 5.4e-51 205.7 151 65.6
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.4e-51 205.7 175 62.9
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 2.0e-50 203.8 126 77.0
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 2.0e-50 203.8 126 77.0
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 9.4e-48 194.9 108 81.5
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 1.2e-47 194.5 132 71.2
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 7.7e-42 175.3 250 38.4
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla HOM05D006315 ORTHO05D008052 1.8e-38 164.1 147 62.6
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 2.2e-36 157.1 239 36.4
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 6.6e-33 145.6 238 36.1
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 3.6e-31 139.8 107 70.1
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 1.6e-18 97.8 53 83.0
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 1.3e-17 94.7 90 55.6
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 6.6e-17 92.4 188 36.2
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 3.1e-14 83.6 64 57.8
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 3.7e-12 76.6 138 41.3
EL10Ac4g09000 Beta vulgaris HOM05D006315 ORTHO05D008052 1.0e-09 68.6 38 84.2
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 1.0e-09 68.6 47 63.8
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 2.1e-07 60.8 39 71.8
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 2.1e-07 60.8 39 71.8
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 3.6e-07 60.1 117 33.3
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 1.4e-06 58.2 117 32.5


User provided reference genes

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