Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold139G35366 Striga asiatica HOM05D029933 ORTHO05D037770 3.6e-140 501.5 246 100.0
SGA_v2.0_scaffold1056G53815 Striga asiatica HOM05D029933 ORTHO05D037770 7.6e-37 158.3 142 64.1
SGA_v2.0_scaffold81G26092 Striga asiatica HOM05D005578 ORTHO05D006969 3.2e-19 99.8 95 58.9
Manes.12G063605 Manihot esculenta HOM05D000004 ORTHO05D000002 2.4e-14 83.6 81 43.2
SGA_v2.0_scaffold59G20758 Striga asiatica HOM05D000004 ORTHO05D000002 2.0e-13 80.5 80 47.5
SGA_v2.0_scaffold62G21482 Striga asiatica HOM05D029933 ORTHO05D037770 1.9e-11 73.9 66 63.6
Manes.03G212950 Manihot esculenta HOM05D003122 ORTHO05D000002 6.0e-10 68.9 105 38.1
Ca_05385_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.9e-10 68.6 77 39.0
Ca_12407_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-09 67.4 78 37.2
SGA_v2.0_scaffold80G25690 Striga asiatica HOM05D029933 ORTHO05D000002 1.1e-08 64.7 117 39.3
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 9.6e-08 61.6 115 34.8
VMungo0720G0631 Vigna mungo HOM05D003122 ORTHO05D000002 6.2e-07 58.9 78 35.9
THA.LOC104803465 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.1e-07 58.5 59 45.8
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 1.4e-06 57.8 78 37.2
ClCG11G012200 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.4e-06 57.0 95 34.7
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 5.3e-06 55.8 55 41.8
VMungo0720G1354 Vigna mungo HOM05D004974 ORTHO05D001537 6.9e-06 55.5 78 34.6


User provided reference genes

Program Settings