Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 2.9e-100 368.6 193 100.0
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 2.5e-59 232.6 245 58.8
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.3e-52 210.3 262 53.1
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 2.1e-50 203.0 237 54.9
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 6.1e-50 201.4 150 72.0
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 6.1e-50 201.4 237 52.7
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 1.2e-45 187.2 189 59.3
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 4.2e-43 178.7 228 50.0
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 7.2e-43 177.9 99 92.9
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 9.4e-43 177.6 212 53.3
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 1.6e-42 176.8 108 85.2
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 3.6e-42 175.6 109 84.4
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 6.1e-42 174.9 214 50.0
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.8e-41 173.3 240 47.1
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.3e-41 172.9 101 86.1
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.3e-41 172.9 101 86.1
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 3.0e-41 172.6 217 50.2
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 3.0e-41 172.6 103 87.4
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 3.0e-41 172.6 220 48.6
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 6.8e-41 171.4 224 47.3
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 6.8e-41 171.4 104 82.7
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 8.8e-41 171.0 219 49.8
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.5e-40 170.2 99 88.9
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.5e-40 170.2 99 88.9
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.5e-40 170.2 99 88.9
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.6e-40 169.5 212 50.5
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.6e-40 169.5 212 50.5
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 2.6e-40 169.5 216 48.1
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 3.4e-40 169.1 220 47.3
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 4.4e-40 168.7 103 82.5
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 4.4e-40 168.7 213 49.8
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 7.5e-40 167.9 99 86.9
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 7.5e-40 167.9 117 76.1
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 7.5e-40 167.9 227 49.8
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 7.5e-40 167.9 99 85.9
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 1.3e-39 167.2 104 80.8
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 1.3e-39 167.2 104 81.7
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.7e-39 166.8 217 48.4
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 2.8e-39 166.0 98 84.7
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 3.7e-39 165.6 218 50.5
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 3.7e-39 165.6 98 86.7
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 4.9e-39 165.2 113 72.6
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.9e-39 165.2 95 89.5
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 4.9e-39 165.2 98 83.7
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 6.3e-39 164.9 218 48.2
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 6.3e-39 164.9 99 85.9
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 6.3e-39 164.9 113 75.2
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 8.3e-39 164.5 98 84.7
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 8.3e-39 164.5 215 48.4
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 8.3e-39 164.5 97 85.6
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 8.3e-39 164.5 108 77.8
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 1.1e-38 164.1 218 49.1
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.8e-38 163.3 119 73.1
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.4e-38 162.9 98 83.7
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 3.1e-38 162.5 227 48.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 5.4e-38 161.8 100 83.0
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 7.0e-38 161.4 126 69.8
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.2e-37 160.6 98 82.7
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.2e-37 160.6 119 69.7
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 2.7e-37 159.5 98 79.6
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.7e-37 159.5 98 81.6
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.7e-37 159.5 108 74.1
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 4.5e-37 158.7 98 82.7
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 7.7e-37 157.9 98 80.6
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 1.7e-36 156.8 219 45.7
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 1.7e-36 156.8 215 46.0
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 1.7e-36 156.8 218 47.7
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.3e-36 156.4 218 45.4
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.3e-36 156.4 98 79.6
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.6e-36 154.8 218 45.0
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 6.6e-36 154.8 214 46.7
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 3.3e-35 152.5 105 72.4
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.6e-34 150.2 113 66.4
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 2.1e-34 149.8 214 46.7
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 4.7e-34 148.7 107 71.0
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 6.1e-34 148.3 105 71.4
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 3.0e-33 146.0 99 71.7
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 3.0e-33 146.0 99 71.7
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 2.6e-32 142.9 217 43.3
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 2.2e-31 139.8 197 43.1
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 6.3e-31 138.3 98 74.5
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.4e-30 137.1 215 43.3
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.8e-30 136.7 209 42.6
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 3.2e-30 136.0 80 86.2
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 9.2e-30 134.4 220 43.6
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 3.5e-29 132.5 198 44.9
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 4.6e-29 132.1 97 71.1
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.3e-28 130.6 100 67.0
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 5.6e-27 125.2 102 62.7
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.1e-26 123.2 98 65.3
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 6.1e-26 121.7 98 59.2
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 3.4e-24 115.9 86 68.6
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 5.8e-24 115.2 209 38.3
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 5.8e-24 115.2 99 56.6
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.5e-24 114.8 75 81.3
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 1.3e-23 114.0 103 57.3
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 1.3e-23 114.0 103 57.3
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 1.3e-23 114.0 103 57.3
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.9e-23 112.8 103 56.3
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.9e-23 112.8 103 56.3
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.9e-23 112.8 103 56.3
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.9e-23 112.8 210 35.7
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 1.4e-22 110.5 103 56.3
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 9.2e-22 107.8 98 56.1
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 2.0e-21 106.7 113 47.8
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.0e-21 106.7 62 88.7
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 3.0e-20 102.8 100 53.0
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 5.0e-20 102.1 149 39.6
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 5.0e-20 102.1 97 57.7
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 1.6e-18 97.1 62 80.6
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 5.2e-17 92.0 113 40.7
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 6.8e-17 91.7 66 69.7
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 2.6e-16 89.7 76 60.5
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 2.6e-16 89.7 89 49.4
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 3.4e-16 89.4 73 63.0
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 4.4e-16 89.0 73 63.0
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 7.5e-16 88.2 119 44.5
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 2.4e-14 83.2 53 75.5
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 9.2e-14 81.3 209 31.6
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 9.2e-14 81.3 62 75.8
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.6e-12 75.1 53 71.7
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.6e-12 75.1 53 71.7
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 8.6e-12 74.7 113 39.8
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.5e-11 73.9 45 77.8
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.8e-10 69.7 53 66.0
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.4e-09 67.4 38 84.2
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.5e-08 63.9 66 43.9
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 4.4e-08 62.4 50 58.0
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 4.4e-08 62.4 66 47.0
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 9.9e-08 61.2 78 48.7
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 8.4e-07 58.2 36 75.0
MCO01G785 Micromonas commoda HOM05D005370 ORTHO05D006659 1.9e-06 57.0 148 29.1


User provided reference genes

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