Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold138G35258 Striga asiatica HOM05D000239 ORTHO05D405931 5.1e-96 354.4 176 100.0
SGA_v2.0_scaffold184G39922 Striga asiatica HOM05D000239 ORTHO05D000484 1.4e-08 63.9 50 64.0
Duzib093G0579 Durio zibethinus HOM05D000239 ORTHO05D000484 5.3e-08 62.0 54 53.7
Ca_11624_v3 Cicer arietinum L. HOM05D000239 ORTHO05D000484 1.2e-07 60.8 51 58.8
Migut.L01753 Erythranthe guttata HOM05D000239 ORTHO05D000484 2.0e-07 60.1 31 80.6
Gohir.A09G135600 Gossypium hirsutum HOM05D000239 ORTHO05D000484 2.0e-07 60.1 49 57.1
Oeu018717.1 Olea europaea HOM05D000239 ORTHO05D000484 2.0e-07 60.1 31 80.6
Duzib106G1586 Durio zibethinus HOM05D000239 ORTHO05D000484 2.6e-07 59.7 51 56.9
Glyma.10G066000 Glycine max HOM05D000239 ORTHO05D000484 4.5e-07 58.9 31 77.4
Gohir.D09G137700 Gossypium hirsutum HOM05D000239 ORTHO05D000484 4.5e-07 58.9 39 66.7
Gorai.006G158200 Gossypium raimondii HOM05D000239 ORTHO05D000484 4.5e-07 58.9 39 66.7
Lj1g0006397 Lotus japonicus HOM05D000239 ORTHO05D000484 4.5e-07 58.9 51 56.9
Lalb_Chr25g0288691 Lupinus albus HOM05D000239 ORTHO05D000484 4.5e-07 58.9 31 77.4
Thecc.05G080800 Theobroma cacao HOM05D000239 ORTHO05D000484 4.5e-07 58.9 31 80.6
Lalb_Chr02g0155131 Lupinus albus HOM05D000239 ORTHO05D000484 5.8e-07 58.5 51 56.9
Nitab4.5_0006360g0060 Nicotiana tabacum HOM05D000239 ORTHO05D000484 7.6e-07 58.2 32 75.0
SGA_v2.0_scaffold40G15404 Striga asiatica HOM05D000239 ORTHO05D000484 7.6e-07 58.2 36 66.7
Duzib128G0860 Durio zibethinus HOM05D000239 ORTHO05D000484 9.9e-07 57.8 61 47.5
Peaxi162Scf00433g00412 Petunia axillaris HOM05D000239 ORTHO05D000484 9.9e-07 57.8 32 75.0
FAN02G0021 Fragaria x ananassa HOM05D000239 ORTHO05D000484 1.3e-06 57.4 33 72.7
SalBow3G2628 Salvia bowleyana HOM05D000239 ORTHO05D000484 1.3e-06 57.4 32 75.0
Glyma.19G191600 Glycine max HOM05D000239 ORTHO05D000484 1.7e-06 57.0 31 77.4
Aa31LG3G2510 Aethionema arabicum HOM05D000239 ORTHO05D000484 2.2e-06 56.6 50 56.0
AUR62033580 Chenopodium quinoa HOM05D000239 ORTHO05D000484 2.2e-06 56.6 31 80.6
COL.COLO4_29817 Corchorus olitorius HOM05D000239 ORTHO05D000484 2.2e-06 56.6 49 55.1
Manes.09G059122 Manihot esculenta HOM05D000239 ORTHO05D000484 2.2e-06 56.6 32 75.0
TAR623G0907 Trochodendron aralioides HOM05D000239 ORTHO05D000484 2.2e-06 56.6 51 51.0
VMungo1383G3075 Vigna mungo HOM05D000239 ORTHO05D000484 2.2e-06 56.6 31 77.4
Atru.chr8.1636 Acer truncatum HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 74.2
Cfa016534 Carpinus fangiana HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 74.2
Cc06_g05240 Coffea canephora HOM05D000239 ORTHO05D000484 2.9e-06 56.2 39 64.1
Haze_19536 Corylus avellana HOM05D000239 ORTHO05D000484 2.9e-06 56.2 34 70.6
Glyma.13G151100 Glycine max HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 74.2
Os09g0566550 Oryza sativa ssp. japonica HOM05D000239 ORTHO05D000484 2.9e-06 56.2 39 64.1
Psat6g078720 Pisum sativum HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 77.4
Potri.016G095750 Populus trichocarpa HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 74.2
TPR.G5668 Trifolium pratense HOM05D003614 ORTHO05D004156 2.9e-06 56.2 31 77.4
TPR.G5675 Trifolium pratense HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 77.4
VMungo0720G1297 Vigna mungo HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 74.2
GSVIVG01033779001 Vitis vinifera HOM05D000239 ORTHO05D000484 2.9e-06 56.2 31 74.2
Glyma.03G191000 Glycine max HOM05D000239 ORTHO05D000484 3.8e-06 55.8 31 74.2
Manes.08G020600 Manihot esculenta HOM05D000239 ORTHO05D000484 3.8e-06 55.8 31 74.2
Phvul.007G223500 Phaseolus vulgaris HOM05D000239 ORTHO05D000484 3.8e-06 55.8 31 74.2
Hund19275 Selenicereus undatus HOM05D000239 ORTHO05D000484 3.8e-06 55.8 31 74.2
Ah.15g091120 Amaranthus hybridus HOM05D000239 ORTHO05D000484 4.9e-06 55.5 31 74.2
ClCG10G019380 Citrullus lanatus HOM05D000239 ORTHO05D000484 4.9e-06 55.5 39 61.5
MELO3C009433.2 Cucumis melo HOM05D000239 ORTHO05D000484 4.9e-06 55.5 39 61.5
CsaV3_3G036810 Cucumis sativus L. HOM05D000239 ORTHO05D000484 4.9e-06 55.5 39 61.5
Sabra06G0090600 Salix brachista HOM05D000239 ORTHO05D000484 4.9e-06 55.5 31 71.0
SGA_v2.0_scaffold75G24796 Striga asiatica HOM05D000239 ORTHO05D000484 4.9e-06 55.5 31 74.2
Cpa.g.sc5.78 Carica papaya HOM05D000239 ORTHO05D000484 6.4e-06 55.1 31 74.2
Eucgr.K02077 Eucalyptus grandis HOM05D000239 ORTHO05D000484 6.4e-06 55.1 40 57.5
Gohir.A04G066300 Gossypium hirsutum HOM05D000239 ORTHO05D000484 6.4e-06 55.1 31 74.2
Gohir.D04G104400 Gossypium hirsutum HOM05D000239 ORTHO05D000484 6.4e-06 55.1 31 74.2
Gorai.009G408200 Gossypium raimondii HOM05D000239 ORTHO05D000484 6.4e-06 55.1 31 74.2
Sopen09g003790 Solanum pennellii HOM05D000239 ORTHO05D000484 6.4e-06 55.1 32 71.9
vmacro07362 Vaccinium macrocarpon HOM05D000239 ORTHO05D000484 6.4e-06 55.1 51 52.9
arahy.Tifrunner.gnm1.ann1.JEK05P Arachis hypogaea HOM05D000239 ORTHO05D000484 8.4e-06 54.7 31 71.0
arahy.Tifrunner.gnm1.ann1.PUEI6W Arachis hypogaea HOM05D000239 ORTHO05D000484 8.4e-06 54.7 31 71.0
Potri.006G115800 Populus trichocarpa HOM05D000239 ORTHO05D000484 8.4e-06 54.7 31 71.0
QL07p040571 Quercus lobata HOM05D000239 ORTHO05D000484 8.4e-06 54.7 31 74.2
TWI77G0467 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 8.4e-06 54.7 31 71.0


User provided reference genes

Program Settings