Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold138G35245 Striga asiatica HOM05D000928 ORTHO05D000023 8.4e-89 330.9 242 100.0
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 5.3e-75 285.0 259 66.8
Migut.D00415 Erythranthe guttata HOM05D000928 ORTHO05D000023 3.6e-39 166.0 198 51.5
MSTRG.21500 Avicennia marina HOM05D000928 ORTHO05D000023 4.4e-37 159.1 184 52.2
SalBow4G0137 Salvia bowleyana HOM05D000928 ORTHO05D000023 1.7e-36 157.1 202 68.3
Oeu039682.1 Olea europaea HOM05D000928 ORTHO05D000023 1.8e-35 153.7 196 46.9
Lj2A1153T50 Lonicera japonica HOM05D000928 ORTHO05D000023 2.2e-33 146.7 200 45.5
unitig_0.g152 Utricularia gibba HOM05D000928 ORTHO05D000023 2.2e-33 146.7 184 76.6
Cc01_g18440 Coffea canephora HOM05D000928 ORTHO05D000023 5.5e-32 142.1 198 44.9
DCAR_012535 Daucus carota HOM05D000928 ORTHO05D000023 1.2e-31 141.0 210 43.3
Nitab4.5_0005119g0010 Nicotiana tabacum HOM05D000928 ORTHO05D000023 6.1e-31 138.7 197 44.7
Nitab4.5_0000086g0120 Nicotiana tabacum HOM05D000928 ORTHO05D000023 1.0e-30 137.9 197 44.2
CAN.G977.2 Capsicum annuum HOM05D000928 ORTHO05D000023 1.8e-30 137.1 190 44.2
Peaxi162Scf00134g00614 Petunia axillaris HOM05D000928 ORTHO05D000023 1.8e-30 137.1 197 44.7
Solyc09g066290.3 Solanum lycopersicum HOM05D000928 ORTHO05D000023 4.0e-30 136.0 190 44.7
Sopen09g027990 Solanum pennellii HOM05D000928 ORTHO05D000023 6.7e-30 135.2 190 44.7
Dinv22415 Davidia involucrata HOM05D000928 ORTHO05D000023 2.6e-29 133.3 187 45.5
CSS0021821 Camellia sinensis var. sinensis HOM05D000928 ORTHO05D000023 5.7e-29 132.1 187 43.9
Ciclev10019294m.g Citrus clementina HOM05D000928 ORTHO05D000023 5.7e-29 132.1 187 45.5
GSVIVG01028305001 Vitis vinifera HOM05D000928 ORTHO05D000023 7.5e-29 131.7 187 44.9
Dinv34612 Davidia involucrata HOM05D000928 ORTHO05D000023 9.7e-29 131.3 187 44.4
MD05G1199500 Malus domestica HOM05D000928 ORTHO05D000023 3.7e-28 129.4 189 45.0
HanXRQChr10g0281051 Helianthus annuus HOM05D000928 ORTHO05D000023 6.3e-28 128.6 171 45.0
Atru.chr5.1649 Acer truncatum HOM05D000928 ORTHO05D000023 8.2e-28 128.3 198 42.9
Sed0008055 Sechium edule HOM05D000928 ORTHO05D000023 8.2e-28 128.3 207 40.1
FAN15G1834 Fragaria x ananassa HOM05D000928 ORTHO05D000023 1.1e-27 127.9 201 42.3
FvH4_2g21700 Fragaria vesca HOM05D000928 ORTHO05D000023 1.4e-27 127.5 189 42.9
FAN24G1393 Fragaria x ananassa HOM05D000928 ORTHO05D000023 1.4e-27 127.5 189 42.9
Lalb_Chr21g0313821 Lupinus albus HOM05D000928 ORTHO05D000023 1.4e-27 127.5 187 42.2
RcHm_v2.0_Chr6g0288381 Rosa chinensis HOM05D000928 ORTHO05D000023 1.4e-27 127.5 189 42.9
Prupe.8G225300 Prunus persica HOM05D000928 ORTHO05D000023 1.8e-27 127.1 189 43.9
QL09p038262 Quercus lobata HOM05D000928 ORTHO05D000023 1.8e-27 127.1 187 43.3
TAR362G0945 Trochodendron aralioides HOM05D000928 ORTHO05D000023 1.8e-27 127.1 198 41.4
arahy.Tifrunner.gnm1.ann1.6R2DR5 Arachis hypogaea HOM05D000928 ORTHO05D000023 3.1e-27 126.3 187 41.7
ECA247G3729 Erigeron canadensis HOM05D000928 ORTHO05D000023 3.1e-27 126.3 174 44.3
MBI18_g15331_MAGBIO Magnolia biondii HOM05D000928 ORTHO05D000023 3.1e-27 126.3 195 39.5
Medtr1g070145 Medicago truncatula HOM05D000928 ORTHO05D000023 3.1e-27 126.3 198 41.4
Rhsim01G0265200 Rhododendron simsii HOM05D000928 ORTHO05D000023 3.1e-27 126.3 201 40.8
TPR.G3579 Trifolium pratense HOM05D000928 ORTHO05D000023 4.1e-27 125.9 198 39.9
Cpa.g.sc50.32 Carica papaya HOM05D000928 ORTHO05D000023 5.3e-27 125.6 188 43.6
FAN27G2497 Fragaria x ananassa HOM05D000928 ORTHO05D000023 7.0e-27 125.2 189 42.9
Manes.13G032900 Manihot esculenta HOM05D000928 ORTHO05D000023 7.0e-27 125.2 187 43.3
CsaV3_7G027390 Cucumis sativus L. HOM05D000928 ORTHO05D000023 9.1e-27 124.8 188 43.1
arahy.Tifrunner.gnm1.ann1.VXR6Q5 Arachis hypogaea HOM05D000928 ORTHO05D000023 1.2e-26 124.4 187 41.2
Duzib138G0579 Durio zibethinus HOM05D000928 ORTHO05D000023 1.2e-26 124.4 188 43.1
Eucgr.K03268 Eucalyptus grandis HOM05D000928 ORTHO05D000023 1.2e-26 124.4 188 42.6
Lj5g0008005 Lotus japonicus HOM05D000928 ORTHO05D000023 1.6e-26 124.0 186 42.5
ClCG09G007750 Citrullus lanatus HOM05D000928 ORTHO05D000023 2.0e-26 123.6 187 42.8
Glyma.13G122300 Glycine max HOM05D000928 ORTHO05D000023 2.7e-26 123.2 185 43.2
Ca_09688_v3 Cicer arietinum L. HOM05D000928 ORTHO05D000023 3.5e-26 122.9 201 40.8
Psat6g055360 Pisum sativum HOM05D000928 ORTHO05D000023 3.5e-26 122.9 186 41.9
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 4.5e-26 122.5 189 40.7
Potri.005G222900 Populus trichocarpa HOM05D000928 ORTHO05D000023 4.5e-26 122.5 187 43.3
CANSAT78G1219 Cannabis sativa HOM05D000928 ORTHO05D000023 5.9e-26 122.1 188 42.0
CiPaw.04G185800 Carya illinoinensis HOM05D000928 ORTHO05D000023 5.9e-26 122.1 187 42.8
Sc17g0000720 Simmondsia chinensis HOM05D000928 ORTHO05D000023 7.7e-26 121.7 206 40.3
TWI12G0138 Tripterygium wilfordii HOM05D000928 ORTHO05D000023 7.7e-26 121.7 187 42.2
Lsat_1_v5_gn_9_8701 Lactuca sativa HOM05D000928 ORTHO05D000023 1.3e-25 120.9 177 42.4
AL4G26460 Arabidopsis lyrata HOM05D000928 ORTHO05D000023 1.7e-25 120.6 189 40.7
CARHR124840 Cardamine hirsuta HOM05D000928 ORTHO05D000023 1.7e-25 120.6 189 40.2
Glyma.10G035900 Glycine max HOM05D000928 ORTHO05D000023 2.2e-25 120.2 185 42.2
Aqoxy1G01844 Aquilegia oxysepala HOM05D000928 ORTHO05D000023 2.9e-25 119.8 203 37.9
Phvul.007G194200 Phaseolus vulgaris HOM05D000928 ORTHO05D000023 2.9e-25 119.8 188 41.0
Thecc.01G260200 Theobroma cacao HOM05D000928 ORTHO05D000023 2.9e-25 119.8 188 42.0
AT2G31240 Arabidopsis thaliana HOM05D000928 ORTHO05D000023 3.8e-25 119.4 189 40.7
Carub.0004s1252 Capsella rubella HOM05D000928 ORTHO05D000023 3.8e-25 119.4 189 40.7
Sabra05G0171600 Salix brachista HOM05D000928 ORTHO05D000023 3.8e-25 119.4 188 42.0
Thhalv10016393m.g Eutrema salsugineum HOM05D000928 ORTHO05D000023 5.0e-25 119.0 189 39.7
MELO3C015740.2 Cucumis melo HOM05D000928 ORTHO05D000023 6.5e-25 118.6 187 41.2
TWI18G0710 Tripterygium wilfordii HOM05D000928 ORTHO05D000023 6.5e-25 118.6 187 41.7
Sp4g13730 Schrenkiella parvula HOM05D000928 ORTHO05D000023 1.1e-24 117.9 189 40.2
ATR0680G125 Amborella trichopoda HOM05D000928 ORTHO05D000023 1.5e-24 117.5 195 37.4
BcaB06g28434 Brassica carinata HOM05D000928 ORTHO05D000023 1.9e-24 117.1 189 39.2
AUR62024728 Chenopodium quinoa HOM05D000928 ORTHO05D000023 1.9e-24 117.1 207 39.1
PSO384G4222 Papaver somniferum HOM05D000928 ORTHO05D000023 2.5e-24 116.7 171 42.7
THA.LOC104800874 Tarenaya hassleriana HOM05D000928 ORTHO05D000023 2.5e-24 116.7 192 40.1
BcaB06g28519 Brassica carinata HOM05D000928 ORTHO05D000023 3.2e-24 116.3 189 39.2
C04p60760 Brassica napus HOM05D000928 ORTHO05D000023 3.2e-24 116.3 189 39.2
BolC4t27567H Brassica oleracea HOM05D000928 ORTHO05D000023 3.2e-24 116.3 189 39.2
A04p24080 Brassica napus HOM05D000928 ORTHO05D000023 5.5e-24 115.5 189 39.2
BraA04t17927Z Brassica rapa HOM05D000928 ORTHO05D000023 5.5e-24 115.5 189 39.2
AUR62011887 Chenopodium quinoa HOM05D000928 ORTHO05D000023 5.5e-24 115.5 189 41.3
Gohir.D11G135700 Gossypium hirsutum HOM05D000928 ORTHO05D000023 5.5e-24 115.5 188 41.5
Gorai.007G145300 Gossypium raimondii HOM05D000928 ORTHO05D000023 5.5e-24 115.5 188 41.5
Gohir.A11G130000 Gossypium hirsutum HOM05D000928 ORTHO05D000023 2.1e-23 113.6 188 40.4
EL10Ac5g10413 Beta vulgaris HOM05D000928 ORTHO05D000023 4.7e-23 112.5 239 36.0
Hund09597 Selenicereus undatus HOM05D000928 ORTHO05D000023 4.7e-23 112.5 191 37.7
Os02g0820300 Oryza sativa ssp. japonica HOM05D000928 ORTHO05D000023 2.3e-22 110.2 176 38.1
HPP92_013000 Vanilla planifolia HOM05D000928 ORTHO05D000023 2.3e-22 110.2 176 38.6
Zm00001eb191190 Zea mays HOM05D000928 ORTHO05D000023 3.0e-22 109.8 176 38.1
TAR633G0595 Trochodendron aralioides HOM05D000928 ORTHO05D000023 4.0e-22 109.4 197 36.5
Haze_24611 Corylus avellana HOM05D000928 ORTHO05D000023 6.8e-22 108.6 187 40.1
Cfa002412 Carpinus fangiana HOM05D000928 ORTHO05D000023 2.0e-21 107.1 187 39.6
Gohir.A08G189400 Gossypium hirsutum HOM05D000928 ORTHO05D000023 5.7e-21 105.5 188 37.8
vmacro14840 Vaccinium macrocarpon HOM05D000928 ORTHO05D000023 7.5e-21 105.1 69 76.8
MD10G1185700 Malus domestica HOM05D000928 ORTHO05D000023 1.7e-20 104.0 69 75.4
PGSC0003DMG400009714 Solanum tuberosum HOM05D000928 ORTHO05D000023 2.8e-20 103.2 68 76.5
Ah.11g049660 Amaranthus hybridus HOM05D000928 ORTHO05D000023 6.3e-20 102.1 171 39.8
VMungo0720G2989 Vigna mungo HOM05D000928 ORTHO05D000023 1.8e-19 100.5 69 72.5
SHI09819 Sapria himalayana HOM05D000928 ORTHO05D000023 3.1e-19 99.8 69 71.0
COL.COLO4_05174 Corchorus olitorius HOM05D000928 ORTHO05D000023 3.5e-18 96.3 171 37.4
CDE06G1208 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 5.9e-18 95.5 213 31.0
Gohir.D08G207900 Gossypium hirsutum HOM05D000928 ORTHO05D000023 3.8e-17 92.8 69 68.1
Gorai.004G220300 Gossypium raimondii HOM05D000928 ORTHO05D000023 3.8e-17 92.8 69 68.1
TAR633G2766 Trochodendron aralioides HOM05D000928 ORTHO05D000023 3.2e-16 89.7 209 31.6
CDE06G2473 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 4.2e-16 89.4 186 31.7
Actinidia09558 Actinidia chinensis HOM05D000928 ORTHO05D000023 3.6e-15 86.3 193 32.6
HPP92_028102 Vanilla planifolia HOM05D000928 ORTHO05D000023 4.7e-15 85.9 68 58.8
SEGI_24893 Sequoiadendron giganteum HOM05D000928 ORTHO05D000023 8.0e-15 85.1 184 30.4
Cfa002415 Carpinus fangiana HOM05D000928 ORTHO05D000023 6.8e-14 82.0 182 34.1
Haze_24612 Corylus avellana HOM05D000928 ORTHO05D000023 4.4e-13 79.3 182 33.0
CDE02G2275 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 7.5e-13 78.6 179 30.7
Os03g0149400 Oryza sativa ssp. japonica HOM05D000928 ORTHO05D000023 4.9e-12 75.9 171 31.0
Aqoxy7G03339 Aquilegia oxysepala HOM05D000928 ORTHO05D000023 1.1e-11 74.7 69 55.1
SEGI_25335 Sequoiadendron giganteum HOM05D000928 ORTHO05D000023 1.7e-09 67.4 69 47.8
Zm00001eb003970 Zea mays HOM05D000928 ORTHO05D000023 8.6e-09 65.1 66 47.0
Pp3c18_11090 Physcomitrium patens HOM05D000928 ORTHO05D000023 6.8e-06 55.5 68 42.6


User provided reference genes

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