Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 7.3e-156 553.9 291 100.0
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 7.4e-108 394.4 291 71.5
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 2.1e-102 376.3 291 70.4
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 1.0e-101 374.0 289 69.2
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 1.1e-100 370.5 282 69.1
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 1.7e-99 366.7 287 71.4
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 1.1e-98 364.0 287 65.9
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 1.4e-98 363.6 287 65.9
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 4.1e-98 362.1 282 68.1
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 5.3e-98 361.7 283 66.4
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 7.0e-98 361.3 288 64.9
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.2e-96 356.3 267 67.4
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 2.2e-96 356.3 287 65.2
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 3.8e-96 355.5 282 65.6
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 5.0e-96 355.1 255 69.8
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 6.5e-96 354.8 265 67.5
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 8.5e-96 354.4 271 68.3
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 2.5e-95 352.8 257 69.3
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.5e-95 352.8 271 67.5
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 3.2e-95 352.4 285 64.6
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 5.5e-95 351.7 271 67.9
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 7.2e-95 351.3 284 66.9
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 9.4e-95 350.9 260 67.7
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 1.2e-94 350.5 251 69.7
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 2.7e-94 349.4 264 66.3
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 2.7e-94 349.4 269 66.9
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 6.1e-94 348.2 287 64.8
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 6.1e-94 348.2 267 67.4
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 1.0e-93 347.4 267 67.0
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.8e-93 346.7 264 65.9
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 2.3e-93 346.3 266 65.0
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 3.9e-93 345.5 304 61.2
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 5.2e-93 345.1 260 66.5
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 5.2e-93 345.1 290 63.4
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 5.7e-92 341.7 264 65.5
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 9.7e-92 340.9 263 66.5
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 1.3e-91 340.5 285 61.8
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 2.8e-91 339.3 314 59.6
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 2.8e-91 339.3 292 63.7
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 6.3e-91 338.2 264 64.8
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.1e-90 337.4 292 63.4
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.4e-90 337.0 292 63.4
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 1.8e-90 336.7 298 62.1
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 2.4e-90 336.3 283 64.7
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 2.4e-90 336.3 266 63.9
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 3.1e-90 335.9 286 60.1
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.1e-90 335.9 292 62.7
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 4.1e-90 335.5 242 69.4
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 5.3e-90 335.1 289 59.9
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 9.1e-90 334.3 274 62.4
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 3.5e-89 332.4 266 62.0
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 5.9e-89 331.6 284 62.0
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 1.0e-88 330.9 294 60.9
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 1.3e-88 330.5 262 63.4
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 2.9e-88 329.3 257 62.6
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 5.0e-88 328.6 282 61.7
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 5.0e-88 328.6 227 71.8
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 1.5e-87 327.0 261 62.5
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 1.5e-87 327.0 254 65.0
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 3.2e-87 325.9 287 59.6
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 3.2e-87 325.9 237 68.8
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 5.5e-87 325.1 262 62.6
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 7.2e-87 324.7 255 64.7
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 7.2e-87 324.7 255 62.7
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 7.2e-87 324.7 282 61.3
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.6e-86 323.6 268 60.1
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 2.1e-86 323.2 298 59.4
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 3.6e-86 322.4 252 64.3
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 1.0e-85 320.9 257 61.5
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 3.0e-85 319.3 228 70.2
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 4.0e-85 318.9 261 62.1
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 5.2e-85 318.5 257 61.1
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.2e-84 317.4 252 61.5
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 2.6e-84 316.2 258 61.2
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 5.7e-84 315.1 252 62.7
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 1.1e-82 310.8 267 57.7
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 1.8e-82 310.1 293 57.0
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 4.1e-82 308.9 274 57.3
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 2.9e-80 302.8 227 64.3
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.2e-79 299.3 292 58.2
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 7.2e-79 298.1 227 67.4
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 9.4e-79 297.7 228 63.2
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 5.2e-77 292.0 206 72.3
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 5.7e-76 288.5 271 58.3
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 7.0e-74 281.6 260 58.5
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 9.1e-74 281.2 292 55.5
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 6.6e-72 275.0 268 53.4
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 3.6e-70 269.2 227 64.8
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 6.8e-69 265.0 430 39.5
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 9.2e-66 254.6 294 51.0
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.7e-64 250.4 261 55.2
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 5.0e-64 248.8 248 50.0
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 5.0e-64 248.8 233 58.8
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 2.1e-62 243.4 247 51.4
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.2e-60 237.7 298 44.3
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.7e-59 233.8 223 53.4
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 4.7e-54 215.7 244 46.7
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 2.2e-51 206.8 150 70.7
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 3.9e-48 196.1 186 58.6
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 1.8e-45 187.2 138 65.9
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 7.8e-41 171.8 172 58.1
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 1.7e-35 154.1 88 81.8
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 3.9e-32 142.9 96 67.7
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.7e-25 120.2 73 75.3
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 3.6e-22 109.8 58 91.4
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.4e-21 107.8 93 49.5
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 2.9e-19 100.1 73 64.4
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 7.4e-15 85.5 70 61.4
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 1.6e-14 84.3 87 56.3
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 3.1e-13 80.1 55 63.6
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.0e-11 75.1 53 62.3
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 1.0e-11 75.1 50 72.0
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.7e-11 74.3 52 67.3
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.2e-09 68.2 76 44.7
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 8.7e-08 62.0 86 44.2
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 7.4e-07 58.9 81 33.3


User provided reference genes

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