Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 2.2e-225 785.4 433 100.0
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.3e-100 370.9 297 63.0
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 2.9e-100 369.8 299 62.2
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.9e-100 369.8 288 64.9
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 6.5e-100 368.6 286 63.6
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 1.4e-99 367.5 299 61.9
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 3.2e-99 366.3 299 61.9
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 3.2e-99 366.3 299 61.5
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 5.5e-99 365.5 297 62.3
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 5.5e-99 365.5 299 61.5
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 5.5e-99 365.5 294 60.9
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 7.2e-99 365.2 299 62.2
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 9.4e-99 364.8 295 62.4
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 9.4e-99 364.8 292 63.4
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 2.1e-98 363.6 299 60.2
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 2.7e-98 363.2 295 61.7
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 2.7e-98 363.2 299 60.9
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 2.7e-98 363.2 299 60.9
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 2.7e-98 363.2 286 61.9
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 3.6e-98 362.8 299 61.5
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 3.6e-98 362.8 286 64.0
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 3.6e-98 362.8 299 61.2
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 4.6e-98 362.5 299 60.9
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 4.6e-98 362.5 299 60.5
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 6.1e-98 362.1 299 60.2
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 6.1e-98 362.1 299 61.2
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 7.9e-98 361.7 299 61.2
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.0e-97 361.3 288 61.5
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 1.0e-97 361.3 299 60.9
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 1.0e-97 361.3 295 60.7
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 1.0e-97 361.3 299 60.5
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 1.0e-97 361.3 299 60.5
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 1.0e-97 361.3 299 60.9
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 1.4e-97 360.9 299 59.9
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 1.4e-97 360.9 295 61.7
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.8e-97 360.5 299 61.2
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 1.8e-97 360.5 299 60.9
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 1.8e-97 360.5 297 61.6
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.8e-97 360.5 299 60.9
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 2.3e-97 360.1 299 60.2
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.0e-97 359.8 295 62.0
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 3.0e-97 359.8 299 59.9
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 3.0e-97 359.8 299 60.5
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 3.0e-97 359.8 294 60.2
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 3.9e-97 359.4 299 60.2
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 5.1e-97 359.0 299 60.2
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 5.1e-97 359.0 299 59.9
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 6.7e-97 358.6 299 61.2
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 8.8e-97 358.2 295 61.0
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 8.8e-97 358.2 295 60.3
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 8.8e-97 358.2 299 60.5
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 8.8e-97 358.2 295 61.7
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 8.8e-97 358.2 299 60.2
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 8.8e-97 358.2 299 60.5
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 8.8e-97 358.2 294 60.5
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.1e-96 357.8 299 59.2
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.5e-96 357.5 299 59.2
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 1.5e-96 357.5 299 59.9
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.5e-96 357.5 288 61.8
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.5e-96 357.5 295 61.4
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.5e-96 357.5 295 61.4
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 1.5e-96 357.5 299 59.5
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 1.5e-96 357.5 294 60.5
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 2.0e-96 357.1 295 60.0
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.0e-96 357.1 296 61.5
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 2.0e-96 357.1 299 59.9
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.0e-96 357.1 295 60.3
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 2.5e-96 356.7 295 60.7
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 2.5e-96 356.7 294 60.9
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 2.5e-96 356.7 286 61.5
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 2.5e-96 356.7 299 60.2
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 2.5e-96 356.7 299 59.5
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 3.3e-96 356.3 299 58.9
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 3.3e-96 356.3 299 60.2
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.3e-96 356.3 295 61.4
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 4.3e-96 355.9 302 59.6
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 4.3e-96 355.9 299 59.5
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 4.3e-96 355.9 288 61.8
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 4.3e-96 355.9 299 59.2
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 5.7e-96 355.5 295 61.0
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 5.7e-96 355.5 288 61.5
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 5.7e-96 355.5 295 60.0
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 5.7e-96 355.5 297 61.3
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 7.4e-96 355.1 299 60.2
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 7.4e-96 355.1 295 60.3
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 9.7e-96 354.8 295 60.7
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 9.7e-96 354.8 295 60.7
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 9.7e-96 354.8 299 59.5
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 1.3e-95 354.4 295 60.7
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 1.3e-95 354.4 294 61.6
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.3e-95 354.4 297 60.6
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.2e-95 353.6 297 59.9
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 2.2e-95 353.6 294 60.2
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 2.2e-95 353.6 295 60.3
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 2.2e-95 353.6 295 61.0
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.2e-95 353.6 299 59.9
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 2.8e-95 353.2 288 61.1
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 3.7e-95 352.8 295 60.7
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 3.7e-95 352.8 288 61.5
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 3.7e-95 352.8 288 61.5
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 4.8e-95 352.4 288 61.5
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 8.2e-95 351.7 294 59.9
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 8.2e-95 351.7 293 60.4
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 1.4e-94 350.9 294 59.9
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 1.4e-94 350.9 299 59.5
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 1.4e-94 350.9 295 60.0
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 4.1e-94 349.4 295 59.7
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 5.3e-94 349.0 295 59.7
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 5.3e-94 349.0 295 59.7
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 5.3e-94 349.0 295 59.7
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 5.3e-94 349.0 295 59.7
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 5.3e-94 349.0 295 59.7
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 5.3e-94 349.0 299 57.5
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 6.9e-94 348.6 295 60.0
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 6.9e-94 348.6 295 60.0
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 6.9e-94 348.6 296 60.5
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 6.9e-94 348.6 290 59.3
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 9.1e-94 348.2 294 59.2
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 1.5e-93 347.4 299 58.9
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 2.0e-93 347.1 288 59.0
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 2.0e-93 347.1 295 59.7
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 5.9e-93 345.5 299 58.2
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 5.9e-93 345.5 299 58.2
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.3e-92 344.4 286 60.5
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 2.5e-91 340.1 294 58.2
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 8.8e-89 331.6 305 56.1
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.5e-88 330.9 312 55.8
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.5e-88 330.9 299 56.2
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 2.0e-88 330.5 282 59.6
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 3.3e-88 329.7 296 58.4
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 9.7e-88 328.2 286 58.4
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 9.7e-88 328.2 298 55.4
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 1.7e-87 327.4 317 54.3
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.8e-87 326.6 288 57.3
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 3.7e-87 326.2 286 59.4
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.4e-86 323.6 290 56.9
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.5e-85 320.9 293 58.0
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.5e-85 319.7 286 58.4
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.0e-84 318.2 299 55.5
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.9e-84 316.6 286 57.7
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.0e-84 315.8 293 57.3
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.5e-83 313.5 302 53.6
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.2e-82 311.2 286 56.6
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.2e-82 311.2 278 58.3
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.6e-82 310.8 276 59.4
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.6e-82 310.8 279 57.7
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 2.1e-82 310.5 303 52.5
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.1e-82 310.5 296 55.7
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.4e-80 302.8 301 54.5
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.8e-79 299.3 286 53.5
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 5.9e-77 292.4 282 54.6
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.8e-73 280.8 293 53.2
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 6.8e-73 278.9 297 52.2
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.0e-72 277.3 284 51.8
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.1e-70 271.6 244 56.6
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.7e-69 266.9 292 51.7
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.8e-62 244.2 287 49.5
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 9.2e-46 188.7 151 62.9
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 3.0e-44 183.7 282 38.3
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 2.1e-42 177.6 280 38.6
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 1.5e-40 171.4 210 45.7
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.7e-39 167.9 139 61.2
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 2.4e-38 164.1 150 58.0
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 3.6e-34 150.2 121 57.9
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 7.6e-32 142.5 187 39.6
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 3.7e-31 140.2 105 60.0
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 4.9e-31 139.8 129 58.9
Medtr0776s0010 Medicago truncatula HOM05D001546 ORTHO05D004259 4.9e-31 139.8 306 30.7
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.1e-30 138.7 118 58.5
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.4e-25 121.7 204 34.8
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.4e-25 121.7 206 35.0
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.6e-24 117.5 278 30.6
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 4.4e-24 116.7 288 29.5
CBR_g46749 Chara braunii HOM05D003621 ORTHO05D004259 1.4e-22 111.7 195 31.8
Lsat_1_v5_gn_3_101741 Lactuca sativa HOM05D003621 ORTHO05D004259 1.1e-17 95.5 101 49.5
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 3.1e-17 94.0 138 39.1
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.8e-16 89.7 76 53.9
Lsat_1_v5_gn_1_124140 Lactuca sativa HOM05D003621 ORTHO05D004259 5.4e-14 83.2 74 50.0
BcaB03g14578 Brassica carinata HOM05D003621 ORTHO05D004259 1.2e-13 82.0 129 37.2
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.0e-13 79.7 73 50.7
SalBow6G0008 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.3e-12 78.6 82 48.8
HanXRQChr10g0282301 Helianthus annuus HOM05D003621 ORTHO05D004259 3.0e-12 77.4 69 47.8
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.5e-08 65.1 69 39.1
PRCOL_00002901 Prasinoderma coloniale HOM05D000181 ORTHO05D007018 7.6e-08 62.8 173 28.3


User provided reference genes

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