Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 3.7e-103 378.3 194 100.0
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 1.9e-27 126.7 81 81.5
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 5.2e-25 118.6 67 86.6
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.2e-24 117.5 77 76.6
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 1.2e-24 117.5 108 59.3
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.0e-24 116.7 75 80.0
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 2.6e-24 116.3 76 77.6
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.6e-24 116.3 82 76.8
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.6e-24 116.3 82 76.8
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 2.6e-24 116.3 82 76.8
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 2.6e-24 116.3 76 78.9
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 2.6e-24 116.3 80 75.0
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 3.4e-24 115.9 76 77.6
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 4.4e-24 115.5 76 76.3
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 4.4e-24 115.5 76 76.3
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 5.8e-24 115.2 76 76.3
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 7.6e-24 114.8 76 76.3
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 7.6e-24 114.8 83 73.5
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 9.9e-24 114.4 76 77.6
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 9.9e-24 114.4 76 76.3
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 9.9e-24 114.4 82 74.4
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 9.9e-24 114.4 82 74.4
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 9.9e-24 114.4 83 71.1
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 1.3e-23 114.0 62 88.7
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 1.3e-23 114.0 62 88.7
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.3e-23 114.0 69 84.1
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.3e-23 114.0 76 76.3
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.7e-23 113.6 67 82.1
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.7e-23 113.6 82 72.0
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 1.7e-23 113.6 76 76.3
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.7e-23 113.6 76 76.3
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.7e-23 113.6 82 73.2
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.7e-23 113.6 62 88.7
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 2.2e-23 113.2 83 72.3
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 2.2e-23 113.2 76 77.6
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.2e-23 113.2 75 78.7
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 2.2e-23 113.2 76 76.3
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.9e-23 112.8 82 73.2
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.9e-23 112.8 82 73.2
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 2.9e-23 112.8 76 73.7
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 2.9e-23 112.8 76 75.0
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.9e-23 112.8 75 76.0
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 3.8e-23 112.5 76 75.0
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 3.8e-23 112.5 76 75.0
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 3.8e-23 112.5 76 72.4
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 3.8e-23 112.5 65 81.5
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 4.9e-23 112.1 76 75.0
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 6.4e-23 111.7 77 72.7
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 6.4e-23 111.7 62 87.1
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 6.4e-23 111.7 65 84.6
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 6.4e-23 111.7 74 73.0
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 8.4e-23 111.3 69 81.2
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 8.4e-23 111.3 69 79.7
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.1e-22 110.9 82 70.7
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.1e-22 110.9 69 78.3
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.4e-22 110.5 69 79.7
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.4e-22 110.5 76 72.4
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.4e-22 110.5 76 72.4
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.9e-22 110.2 76 72.4
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 1.9e-22 110.2 76 71.1
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.9e-22 110.2 76 73.7
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 2.4e-22 109.8 82 70.7
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 3.2e-22 109.4 76 69.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 3.2e-22 109.4 76 69.7
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 3.2e-22 109.4 75 72.0
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 3.2e-22 109.4 76 72.4
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 3.2e-22 109.4 76 72.4
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 3.2e-22 109.4 76 71.1
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 3.2e-22 109.4 69 79.7
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 5.4e-22 108.6 82 68.3
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 7.1e-22 108.2 74 74.3
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 7.1e-22 108.2 74 74.3
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 7.1e-22 108.2 76 68.4
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 9.2e-22 107.8 76 72.4
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.2e-21 107.5 76 71.1
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 1.2e-21 107.5 76 69.7
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.6e-21 107.1 73 71.2
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.6e-21 107.1 74 74.3
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.6e-21 107.1 76 72.4
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.1e-21 106.7 74 71.6
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.7e-21 106.3 66 75.8
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 2.7e-21 106.3 77 70.1
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 4.6e-21 105.5 74 70.3
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 6.0e-21 105.1 74 71.6
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 6.0e-21 105.1 76 68.4
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 7.8e-21 104.8 74 71.6
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 7.8e-21 104.8 74 71.6
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 7.8e-21 104.8 62 77.4
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 1.0e-20 104.4 69 75.4
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.0e-20 104.4 73 71.2
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.0e-20 104.4 77 67.5
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.0e-20 104.4 71 71.8
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.0e-20 104.4 74 70.3
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 1.7e-20 103.6 62 79.0
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.7e-20 103.6 74 70.3
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 2.3e-20 103.2 74 68.9
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 6.6e-20 101.7 73 68.5
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 6.6e-20 101.7 69 73.9
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 6.6e-20 101.7 68 70.6
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 8.6e-20 101.3 59 79.7
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 8.6e-20 101.3 71 70.4
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 1.5e-19 100.5 74 67.6
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 1.5e-19 100.5 74 67.6
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 1.5e-19 100.5 74 67.6
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 1.5e-19 100.5 74 67.6
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.5e-19 100.5 73 68.5
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.5e-19 100.5 82 61.0
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 4.3e-19 99.0 74 66.2
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.6e-18 97.1 67 70.1
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.8e-17 93.6 82 59.8
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 9.9e-16 87.8 73 60.3
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.3e-15 87.4 61 68.9
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.7e-15 87.0 76 59.2
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 2.4e-14 83.2 57 70.2
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 7.8e-13 78.2 69 58.0
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 2.8e-10 69.7 74 51.4


User provided reference genes

Program Settings