Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 0.0e+00 1495.3 805 100.0
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 0.0e+00 1149.4 804 78.2
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 8.0e-237 824.3 788 61.4
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.9e-214 750.0 794 57.3
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 2.1e-213 746.5 792 56.1
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.5e-211 740.3 792 56.9
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 9.9e-211 737.6 805 55.8
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 4.0e-204 715.7 789 55.8
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.1e-198 697.6 823 54.6
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 7.3e-198 694.9 779 54.0
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 7.3e-198 694.9 797 53.7
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.4e-196 690.6 804 54.6
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 2.6e-195 686.4 805 53.7
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.3e-194 684.1 804 52.5
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 4.2e-193 679.1 798 54.0
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 3.3e-190 669.5 798 54.0
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 9.6e-190 667.9 778 53.7
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 5.8e-187 658.7 805 51.1
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 7.6e-187 658.3 815 52.5
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 3.9e-183 646.0 846 49.2
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 2.5e-182 643.3 773 53.4
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 2.0e-179 633.6 773 53.0
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 2.9e-178 629.8 801 51.7
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 8.4e-178 628.2 800 48.5
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 2.5e-177 626.7 802 49.4
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 4.2e-177 625.9 807 50.3
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 5.7e-174 615.5 771 52.3
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.7e-173 612.8 811 48.1
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 4.1e-172 609.4 804 48.8
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 6.9e-172 608.6 804 48.5
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.2e-171 607.8 809 48.7
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.6e-171 606.7 798 49.6
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 8.5e-170 601.7 807 48.7
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.9e-169 600.5 797 49.8
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.9e-169 600.5 803 47.4
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.5e-169 600.1 802 49.8
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 1.0e-167 594.7 796 49.9
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.5e-166 590.1 812 46.2
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 9.7e-166 588.2 795 46.9
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 1.7e-165 587.4 808 46.7
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 2.2e-165 587.0 785 48.9
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 8.2e-165 585.1 807 47.5
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 1.1e-164 584.7 804 48.5
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 1.4e-164 584.3 806 48.4
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.1e-164 583.2 797 49.2
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 3.1e-164 583.2 755 47.8
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 2.2e-162 577.0 769 50.7
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 2.2e-162 577.0 785 47.4
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 3.8e-162 576.2 798 48.0
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 6.5e-162 575.5 805 49.1
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 8.5e-162 575.1 791 48.9
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.1e-161 574.7 801 49.1
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 3.2e-161 573.2 785 46.5
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 5.5e-161 572.4 875 43.7
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 7.2e-161 572.0 765 49.7
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 7.2e-161 572.0 679 53.9
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 9.4e-161 571.6 785 46.5
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 3.6e-160 569.7 788 48.0
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 3.9e-159 566.2 807 47.1
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 5.1e-159 565.8 805 47.8
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 2.8e-157 560.1 782 46.3
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 3.7e-157 559.7 802 46.0
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 1.1e-156 558.1 772 46.1
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 3.4e-155 553.1 785 46.2
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 8.5e-154 548.5 808 46.0
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.1e-153 548.1 814 47.1
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 5.5e-153 545.8 720 49.4
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 2.1e-152 543.9 799 47.2
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 3.6e-152 543.1 806 45.3
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 6.1e-152 542.3 772 46.6
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 1.8e-151 540.8 806 44.8
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.5e-150 537.7 677 51.7
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 5.7e-150 535.8 770 45.5
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.3e-149 534.6 796 46.2
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 2.8e-149 533.5 760 48.0
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.1e-148 531.6 824 44.3
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 4.1e-148 529.6 776 47.3
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.2e-147 528.1 795 45.3
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.7e-147 525.4 796 45.9
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 6.5e-146 522.3 792 44.2
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 1.1e-145 521.5 810 44.7
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 2.5e-145 520.4 803 45.7
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 7.2e-145 518.8 797 43.9
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 6.1e-144 515.8 812 45.2
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 6.1e-144 515.8 797 44.0
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 2.0e-142 510.8 805 43.6
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 3.3e-142 510.0 795 45.5
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 1.7e-141 507.7 787 44.7
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.8e-140 504.2 797 44.7
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 7.7e-139 498.8 660 47.7
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.6e-136 490.0 801 43.7
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 4.4e-134 483.0 819 42.7
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 9.8e-134 481.9 782 45.0
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.3e-133 481.5 680 49.0
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 6.3e-133 479.2 819 40.7
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.4e-132 478.0 791 44.6
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.8e-132 477.6 788 44.2
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.1e-132 476.9 791 44.4
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 1.3e-130 471.5 797 42.3
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 1.7e-130 471.1 797 42.5
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 4.2e-129 466.5 709 44.7
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.6e-128 464.5 801 43.6
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 3.6e-128 463.4 770 42.7
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.0e-127 461.8 738 42.1
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.4e-124 450.7 797 43.5
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 7.0e-124 449.1 751 39.9
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 4.5e-123 446.4 812 40.0
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 7.8e-123 445.7 642 47.0
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 1.0e-122 445.3 825 39.9
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 1.1e-121 441.8 789 40.1
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.2e-118 431.8 786 40.3
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 5.8e-118 429.5 640 45.8
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 2.2e-117 427.6 782 39.1
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.4e-116 424.9 796 41.6
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 2.7e-115 420.6 782 41.4
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 1.6e-112 411.4 786 41.2
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.6e-112 411.4 789 41.2
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 3.6e-112 410.2 778 39.1
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 3.6e-112 410.2 775 39.2
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 2.3e-111 407.5 603 45.1
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 8.9e-111 405.6 787 40.9
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 3.2e-108 397.1 796 37.4
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 2.1e-107 394.4 793 39.8
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 7.3e-105 386.0 783 37.0
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 7.5e-102 375.9 791 39.2
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 1.3e-98 365.2 769 39.1
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 9.5e-97 359.0 759 39.1
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 4.7e-96 356.7 775 38.3
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 1.3e-93 348.6 768 38.5
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 1.4e-92 345.1 759 37.8
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.2e-92 344.0 783 38.7
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 7.1e-92 342.8 759 38.6
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 9.0e-87 325.9 755 36.8
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 2.9e-77 294.3 483 42.2
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 2.3e-74 284.6 797 33.4
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 5.6e-73 280.0 349 49.0
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 5.6e-73 280.0 349 49.0
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 7.6e-62 243.0 908 29.7
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 1.0e-61 242.7 831 33.1
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 6.5e-61 240.0 690 32.5
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 6.7e-58 229.9 372 41.9
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 5.3e-55 220.3 757 31.2
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 9.4e-52 209.5 827 28.3
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 7.9e-51 206.5 318 43.7
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 3.3e-41 174.5 734 27.4
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 3.3e-41 174.5 363 38.3
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 8.2e-40 169.9 203 49.8
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.1e-31 142.9 138 58.0
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 1.8e-31 142.1 138 58.0
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 1.6e-30 139.0 166 45.8
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 2.0e-30 138.7 425 31.3
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 1.0e-29 136.3 110 65.5
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 2.2e-29 135.2 167 47.9
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 7.2e-28 130.2 258 36.4
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 2.4e-23 115.2 111 55.9
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 2.4e-23 115.2 101 64.4
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 6.1e-19 100.5 127 45.7
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 3.0e-18 98.2 121 47.1
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 8.3e-16 90.1 77 61.0
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 6.6e-13 80.5 117 45.3
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 3.3e-12 78.2 52 71.2
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 7.2e-12 77.0 82 53.7
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 1.2e-11 76.3 82 52.4
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 6.8e-10 70.5 63 57.1
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 8.9e-10 70.1 193 31.1
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 8.9e-10 70.1 140 36.4
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 9.8e-09 66.6 113 42.5
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.3e-08 66.2 45 66.7
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 4.9e-08 64.3 34 85.3
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 3.2e-07 61.6 71 49.3
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.4e-07 60.8 60 61.7


User provided reference genes

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