Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold136G35042 Striga asiatica HOM05D011754 ORTHO05D014689 4.0e-306 1053.9 523 100.0
SGA_v2.0_scaffold185G40046 Striga asiatica HOM05D011754 ORTHO05D014689 2.3e-91 340.5 511 45.6
SGA_v2.0_scaffold101G29754 Striga asiatica HOM05D011754 ORTHO05D014689 2.4e-72 277.3 364 43.7
SGA_v2.0_scaffold319G48528 Striga asiatica HOM05D011754 ORTHO05D014689 7.6e-71 272.3 363 44.1
SGA_v2.0_scaffold136G35040 Striga asiatica HOM05D011754 ORTHO05D014689 1.2e-60 238.4 221 59.3
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 7.9e-52 209.1 127 84.3
SGA_v2.0_scaffold23G10167 Striga asiatica HOM05D011754 ORTHO05D014689 1.9e-29 134.8 90 76.7
SGA_v2.0_scaffold57G20223 Striga asiatica HOM05D011754 ORTHO05D014689 3.7e-25 120.6 69 82.6
SGA_v2.0_scaffold67G22781 Striga asiatica HOM05D011754 ORTHO05D014689 5.4e-24 116.7 82 63.4
SGA_v2.0_scaffold281G46892 Striga asiatica HOM05D011754 ORTHO05D014689 8.0e-20 102.8 92 57.6
SGA_v2.0_scaffold9G04715 Striga asiatica HOM05D008036 ORTHO05D000174 1.2e-15 89.0 159 34.0
SGA_v2.0_scaffold216G42390 Striga asiatica HOM05D011754 ORTHO05D014689 3.5e-15 87.4 82 51.2
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 2.3e-11 74.7 122 36.1
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 5.2e-11 73.6 122 36.1
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 3.4e-10 70.9 333 23.1
HanXRQChr03g0084461 Helianthus annuus HOM05D003964 ORTHO05D000174 1.7e-09 68.6 280 24.3
HanXRQChr05g0150161 Helianthus annuus HOM05D003964 ORTHO05D011997 2.9e-09 67.8 177 27.7
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 3.7e-09 67.4 202 26.7
HanXRQChr12g0359401 Helianthus annuus HOM05D003964 ORTHO05D011997 4.9e-09 67.0 177 28.2
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 4.9e-09 67.0 282 22.3
Medtr1g105785 Medicago truncatula HOM05D008036 ORTHO05D000174 4.9e-09 67.0 174 26.4
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.9e-09 67.0 201 25.4
SGA_v2.0_scaffold82G26258 Striga asiatica HOM05D010852 ORTHO05D002376 8.3e-09 66.2 210 29.0
HanXRQChr05g0160951 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-08 65.9 166 28.3
HanXRQChr07g0205571 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-08 65.9 167 26.9
SGA_v2.0_scaffold272G46356 Striga asiatica HOM05D011754 ORTHO05D014689 1.9e-08 65.1 97 45.4
SGA_v2.0_scaffold403G51004 Striga asiatica HOM05D011754 ORTHO05D014689 2.4e-08 64.7 64 56.2
arahy.Tifrunner.gnm1.ann1.K0L2P8 Arachis hypogaea HOM05D010809 ORTHO05D009978 4.1e-08 63.9 324 20.4
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 3.5e-07 60.8 84 38.1
SGA_v2.0_scaffold29G12331 Striga asiatica HOM05D010852 ORTHO05D002376 1.3e-06 58.9 87 31.0
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-06 58.5 76 34.2
SGA_v2.0_scaffold154G37187 Striga asiatica HOM05D011754 ORTHO05D014689 1.7e-06 58.5 65 50.8
SGA_v2.0_scaffold237G43840 Striga asiatica HOM05D010852 ORTHO05D002376 3.0e-06 57.8 124 33.9
HanXRQChr05g0145471 Helianthus annuus HOM05D003964 ORTHO05D000174 3.9e-06 57.4 167 26.9
BolC3t20719H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-06 57.0 85 34.1
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 5.0e-06 57.0 208 24.0
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 6.6e-06 56.6 84 33.3
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 6.6e-06 56.6 84 33.3
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 6.6e-06 56.6 87 35.6
Psat6g082280 Pisum sativum HOM05D002090 ORTHO05D001923 6.6e-06 56.6 94 30.9
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 8.6e-06 56.2 89 34.8


User provided reference genes

Program Settings