Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.1e-177 625.2 353 100.0
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.6e-157 559.7 336 94.6
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 3.4e-115 419.1 330 76.7
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 7.6e-115 417.9 334 74.3
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 5.6e-102 375.2 335 66.6
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.3e-101 374.0 326 67.8
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.8e-101 372.9 328 63.1
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 4.0e-100 369.0 326 70.6
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.5e-99 367.1 329 65.7
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 2.6e-99 366.3 328 64.0
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.0e-98 364.4 323 67.8
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 3.9e-95 352.4 351 59.3
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 5.1e-95 352.1 325 62.8
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 2.8e-93 346.3 326 63.5
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 6.3e-93 345.1 320 65.9
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.4e-92 344.0 327 64.8
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.4e-92 344.0 327 64.5
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 4.1e-92 342.4 327 63.0
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 4.1e-92 342.4 333 62.2
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 6.9e-92 341.7 327 63.3
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 1.2e-91 340.9 332 58.7
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.5e-91 340.5 322 65.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.5e-91 340.5 341 61.6
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 2.0e-91 340.1 331 63.7
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.6e-91 339.7 331 62.2
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 5.9e-91 338.6 326 60.4
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.7e-90 337.0 322 64.9
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 1.7e-90 337.0 347 59.1
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 2.9e-90 336.3 351 57.5
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 3.8e-90 335.9 329 62.6
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 5.0e-90 335.5 324 58.6
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 6.5e-90 335.1 336 61.6
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.9e-89 333.6 320 65.0
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.9e-89 333.6 316 63.3
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 4.2e-89 332.4 324 60.8
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 4.2e-89 332.4 327 63.9
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 7.2e-89 331.6 331 61.0
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.6e-88 330.5 322 64.3
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 2.7e-88 329.7 318 61.9
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.7e-88 329.7 330 63.6
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 6.1e-88 328.6 322 63.7
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 6.1e-88 328.6 327 63.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 6.1e-88 328.6 328 61.9
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 7.9e-88 328.2 322 64.6
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.9e-88 328.2 330 63.3
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.0e-87 327.8 358 54.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 1.8e-87 327.0 328 62.2
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.8e-87 327.0 333 62.2
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 5.1e-87 325.5 323 62.2
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 5.1e-87 325.5 318 61.9
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 6.7e-87 325.1 325 60.3
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 8.7e-87 324.7 326 62.9
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 8.7e-87 324.7 318 61.6
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 1.1e-86 324.3 316 56.6
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.5e-86 323.9 317 63.4
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 2.2e-85 320.1 322 63.4
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.2e-85 320.1 326 61.7
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 2.2e-85 320.1 329 60.8
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 4.8e-85 318.9 325 62.2
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.8e-85 318.9 325 61.5
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 6.3e-85 318.5 328 61.0
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 8.2e-85 318.2 322 62.4
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.1e-84 317.8 326 59.5
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 1.8e-84 317.0 318 61.0
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 3.1e-84 316.2 324 59.9
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 2.0e-83 313.5 324 59.3
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 2.6e-83 313.2 324 62.3
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 7.7e-83 311.6 326 57.1
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.2e-82 310.1 315 63.5
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 9.4e-81 304.7 323 61.0
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.1e-80 303.5 323 59.1
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 2.7e-80 303.1 329 59.0
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 3.6e-80 302.8 341 46.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.0e-79 301.2 327 61.5
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.1e-79 298.9 329 59.6
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 8.8e-79 298.1 324 57.1
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 7.4e-78 295.0 325 57.2
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 9.7e-78 294.7 328 56.7
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 1.1e-76 291.2 336 56.5
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.1e-76 291.2 326 56.4
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.4e-76 290.8 318 60.4
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 2.4e-76 290.0 326 58.9
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 2.4e-76 290.0 326 58.9
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 3.4e-75 286.2 328 59.5
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 3.8e-74 282.7 329 54.4
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 3.2e-73 279.6 285 63.9
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 9.4e-73 278.1 327 57.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 9.4e-73 278.1 327 57.8
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 2.7e-72 276.6 322 55.0
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 4.7e-72 275.8 326 54.0
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 3.3e-70 269.6 323 56.3
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 3.1e-68 263.1 324 48.5
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.0e-67 260.4 327 43.1
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 9.4e-65 251.5 325 52.3
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 4.4e-62 242.7 311 54.3
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 4.1e-60 236.1 324 49.7
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.2e-59 234.6 232 53.0
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.2e-57 226.5 320 46.2
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 5.5e-57 225.7 166 61.4
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.6e-56 224.2 318 51.3
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 8.0e-56 221.9 169 60.4
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.4e-54 216.5 205 50.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.8e-53 213.4 164 60.4
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.7e-51 206.8 171 58.5
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 7.7e-51 205.3 165 57.0
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.9e-49 200.7 166 53.0
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.2e-49 199.9 161 57.1
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.2e-48 198.0 258 42.2
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.6e-48 197.6 168 56.5
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.0e-38 164.1 205 41.0
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.3e-37 161.4 170 48.8
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.9e-37 159.5 186 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 3.6e-32 143.3 219 54.8
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 6.2e-32 142.5 169 45.6
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 6.8e-31 139.0 337 37.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 6.4e-29 132.5 244 31.6
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.0e-26 125.2 119 53.8
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.1e-25 121.7 111 54.1
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.9e-25 120.9 171 35.7
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 3.1e-23 113.6 76 68.4
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 4.4e-22 109.8 260 42.7
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 2.9e-21 107.1 72 70.8
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.9e-20 104.4 80 63.8
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 6.6e-18 95.9 88 55.7
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.5e-17 94.7 339 28.6
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 4.3e-17 93.2 63 69.8
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.6e-11 74.7 47 74.5
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 5.1e-10 69.7 185 27.0
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 5.6e-09 66.2 54 59.3
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 4.0e-07 60.1 124 33.9


User provided reference genes

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