Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 5.2e-75 284.3 139 100.0
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.1e-56 223.4 134 81.3
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 7.0e-56 220.7 131 79.4
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 1.6e-55 219.5 130 80.0
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 3.5e-55 218.4 130 80.0
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 7.7e-55 217.2 130 76.2
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 2.3e-54 215.7 131 76.3
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 2.9e-54 215.3 131 74.8
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 3.8e-54 214.9 131 76.3
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 5.0e-54 214.5 135 74.8
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 8.6e-54 213.8 129 76.0
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 8.6e-54 213.8 131 75.6
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 1.1e-53 213.4 133 74.4
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 2.5e-53 212.2 131 74.8
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 3.3e-53 211.8 131 74.8
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 3.3e-53 211.8 131 74.0
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 4.3e-53 211.5 131 76.3
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 7.2e-53 210.7 138 73.2
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 7.2e-53 210.7 131 72.5
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 2.1e-52 209.1 134 70.9
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 2.8e-52 208.8 131 71.0
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 3.6e-52 208.4 140 69.3
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 6.1e-52 207.6 131 72.5
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 8.0e-52 207.2 133 76.7
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 1.8e-51 206.1 134 67.9
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 1.8e-51 206.1 183 59.6
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 1.8e-51 206.1 135 71.1
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 3.0e-51 205.3 129 72.1
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 3.0e-51 205.3 130 76.2
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 4.0e-51 204.9 132 72.0
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 5.2e-51 204.5 128 74.2
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 6.8e-51 204.1 122 77.9
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 8.9e-51 203.8 130 73.1
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 8.9e-51 203.8 131 68.7
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.2e-50 203.4 131 72.5
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 1.5e-50 203.0 132 75.8
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 3.4e-50 201.8 132 75.0
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 3.4e-50 201.8 125 75.2
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 3.4e-50 201.8 127 74.0
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 5.7e-50 201.1 124 74.2
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 7.5e-50 200.7 133 73.7
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 9.8e-50 200.3 134 67.2
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 9.8e-50 200.3 132 75.0
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 1.7e-49 199.5 131 70.2
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 2.2e-49 199.1 132 75.0
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 2.2e-49 199.1 134 70.9
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 2.9e-49 198.7 133 73.7
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 2.9e-49 198.7 131 73.3
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 3.7e-49 198.4 132 74.2
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 3.7e-49 198.4 132 74.2
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 4.9e-49 198.0 127 73.2
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 1.4e-48 196.4 127 75.6
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 1.8e-48 196.1 129 69.8
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 3.2e-48 195.3 129 69.0
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 3.2e-48 195.3 129 69.0
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 3.2e-48 195.3 107 84.1
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 3.2e-48 195.3 134 69.4
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 3.2e-48 195.3 131 69.5
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 5.4e-48 194.5 107 85.0
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 5.9e-47 191.0 127 68.5
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 5.9e-47 191.0 107 80.4
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 5.9e-47 191.0 107 82.2
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 1.0e-46 190.3 165 58.8
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 2.3e-46 189.1 107 80.4
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 8.6e-46 187.2 135 65.9
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.1e-45 186.8 107 84.1
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 2.5e-45 185.7 122 72.1
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 7.3e-45 184.1 119 69.7
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 7.3e-45 184.1 119 69.7
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 2.8e-44 182.2 137 65.0
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 1.8e-43 179.5 107 74.8
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 1.8e-43 179.5 107 75.7
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 1.5e-42 176.4 113 71.7
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 9.8e-42 173.7 130 64.6
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 1.7e-41 172.9 122 64.8
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 2.9e-41 172.2 119 64.7
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 4.9e-41 171.4 119 64.7
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 4.9e-41 171.4 119 64.7
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 6.4e-41 171.0 114 71.9
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 8.3e-41 170.6 115 66.1
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 1.1e-40 170.2 119 63.9
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 1.4e-40 169.9 115 67.0
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 1.4e-40 169.9 115 67.0
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 1.9e-40 169.5 115 67.8
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 3.2e-40 168.7 115 66.1
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 9.2e-40 167.2 114 64.0
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 1.6e-39 166.4 119 63.0
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 3.9e-38 161.8 119 59.7
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 7.1e-32 141.0 93 77.4
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 1.6e-31 139.8 140 49.3
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 2.3e-30 136.0 103 59.2
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 2.3e-30 136.0 90 72.2
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 3.0e-30 135.6 104 59.6
Dinv25701 Davidia involucrata HOM05D006998 ORTHO05D008733 8.6e-30 134.0 72 80.6
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 8.6e-30 134.0 95 64.2
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 1.6e-28 129.8 81 76.5
DCAR_011285 Daucus carota HOM05D006998 ORTHO05D008733 2.1e-28 129.4 127 50.4
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 6.2e-28 127.9 81 76.5
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 6.2e-28 127.9 81 76.5
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 4.0e-27 125.2 79 77.2
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 2.0e-26 122.9 84 72.6
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 3.4e-26 122.1 85 72.9
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 8.4e-25 117.5 82 75.6
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 5.4e-24 114.8 87 65.5
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 9.6e-21 104.0 73 65.8
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 1.6e-20 103.2 98 46.9
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 8.1e-20 100.9 70 65.7
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 8.1e-20 100.9 70 67.1
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 1.3e-17 93.6 60 73.3
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 4.6e-15 85.1 84 54.8
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 7.8e-15 84.3 63 66.7
Sed0022519 Sechium edule HOM05D006998 ORTHO05D008733 7.8e-15 84.3 49 69.4
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 3.0e-14 82.4 60 65.0
Cre09.g413300 Chlamydomonas reinhardtii HOM05D006998 ORTHO05D008733 1.1e-13 80.5 60 56.7
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 9.6e-13 77.4 63 55.6
BcaB01g01217 Brassica carinata HOM05D006998 ORTHO05D008733 6.9e-11 71.2 72 48.6
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 5.8e-10 68.2 64 51.6
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 3.2e-08 62.4 49 57.1


User provided reference genes

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