Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34904 Striga asiatica HOM05D004386 ORTHO05D005247 7.4e-183 643.7 306 100.0
SalBow1G5144 Salvia bowleyana HOM05D004386 ORTHO05D005247 4.1e-40 169.5 265 39.6
Migut.H00080 Erythranthe guttata HOM05D004386 ORTHO05D005247 1.9e-37 160.6 267 37.8
Actinidia06000 Actinidia chinensis HOM05D004386 ORTHO05D005247 8.0e-36 155.2 278 34.5
Dinv33445 Davidia involucrata HOM05D004386 ORTHO05D005247 9.7e-34 148.3 272 34.6
unitig_60.g25509 Utricularia gibba HOM05D004386 ORTHO05D005247 9.7e-34 148.3 243 37.0
Lj7A599T80 Lonicera japonica HOM05D004386 ORTHO05D005247 2.8e-33 146.7 279 32.3
Nitab4.5_0007892g0010 Nicotiana tabacum HOM05D004386 ORTHO05D005247 2.8e-33 146.7 277 32.1
PGSC0003DMG400012630 Solanum tuberosum HOM05D004386 ORTHO05D005247 4.8e-33 146.0 266 35.0
Solyc02g086470.3 Solanum lycopersicum HOM05D004386 ORTHO05D005247 8.2e-33 145.2 266 34.6
Sopen02g031190 Solanum pennellii HOM05D004386 ORTHO05D005247 8.2e-33 145.2 266 34.6
Hma1.2p1_1291F.1_g273490 Hydrangea macrophylla HOM05D004386 ORTHO05D005247 1.4e-32 144.4 266 33.8
Cfa007374 Carpinus fangiana HOM05D004386 ORTHO05D005247 1.8e-32 144.1 269 33.1
MD17G1027700 Malus domestica HOM05D004386 ORTHO05D005247 3.1e-32 143.3 266 32.7
Haze_14735 Corylus avellana HOM05D004386 ORTHO05D005247 7.0e-32 142.1 269 32.7
CiPaw.03G043200 Carya illinoinensis HOM05D004386 ORTHO05D005247 3.5e-31 139.8 269 34.2
MD09G1027800 Malus domestica HOM05D004386 ORTHO05D005247 2.9e-30 136.7 266 31.2
DCAR_021718 Daucus carota HOM05D004386 ORTHO05D005247 8.5e-30 135.2 266 33.8
Nitab4.5_0002682g0120 Nicotiana tabacum HOM05D004386 ORTHO05D005247 8.5e-30 135.2 279 31.5
FvH4_6g51280 Fragaria vesca HOM05D004386 ORTHO05D005247 1.1e-29 134.8 264 33.3
RcHm_v2.0_Chr2g0172901 Rosa chinensis HOM05D004386 ORTHO05D005247 1.1e-29 134.8 266 33.1
Atru.chr6.2286 Acer truncatum HOM05D004386 ORTHO05D005247 1.5e-29 134.4 282 32.3
FAN14G1865 Fragaria x ananassa HOM05D004386 ORTHO05D005247 2.5e-29 133.7 264 33.0
FAN02G3912 Fragaria x ananassa HOM05D004386 ORTHO05D005247 3.2e-29 133.3 267 33.3
QL02p074814 Quercus lobata HOM05D004386 ORTHO05D005247 3.2e-29 133.3 269 32.7
GSVIVG01032413001 Vitis vinifera HOM05D004386 ORTHO05D005247 3.2e-29 133.3 266 33.1
Nitab4.5_0006802g0040 Nicotiana tabacum HOM05D004386 ORTHO05D005247 4.2e-29 132.9 279 30.8
Duzib147G0401 Durio zibethinus HOM05D004386 ORTHO05D005247 5.5e-29 132.5 269 31.2
Prupe.3G291000 Prunus persica HOM05D004386 ORTHO05D005247 5.5e-29 132.5 266 31.6
HanXRQChr17g0548511 Helianthus annuus HOM05D004386 ORTHO05D005247 1.2e-28 131.3 267 33.7
FAN05G0117 Fragaria x ananassa HOM05D004386 ORTHO05D005247 2.1e-28 130.6 264 33.0
FAN09G3114 Fragaria x ananassa HOM05D004386 ORTHO05D005247 2.1e-28 130.6 267 33.3
HanXRQChr15g0475331 Helianthus annuus HOM05D004386 ORTHO05D005247 2.1e-28 130.6 275 33.1
CSS0006108 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 4.7e-28 129.4 254 33.1
CSS0036222 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 4.7e-28 129.4 254 33.1
Gohir.A07G222800 Gossypium hirsutum HOM05D004386 ORTHO05D005247 4.7e-28 129.4 269 30.5
DCAR_001447 Daucus carota HOM05D004386 ORTHO05D005247 6.1e-28 129.0 268 34.0
Gohir.D07G229500 Gossypium hirsutum HOM05D004386 ORTHO05D005247 6.1e-28 129.0 256 31.2
Cc07_g01760 Coffea canephora HOM05D004386 ORTHO05D005247 8.0e-28 128.6 279 29.7
Peaxi162Scf00129g01540 Petunia axillaris HOM05D004386 ORTHO05D005247 8.0e-28 128.6 268 32.1
THA.LOC104805372 Tarenaya hassleriana HOM05D004386 ORTHO05D005247 8.0e-28 128.6 265 32.5
Nn4g22656 Nelumbo nucifera HOM05D004386 ORTHO05D005247 1.8e-27 127.5 277 28.9
Cpa.g.sc108.64 Carica papaya HOM05D004386 ORTHO05D005247 2.3e-27 127.1 267 30.3
Gorai.001G264600 Gossypium raimondii HOM05D004386 ORTHO05D005247 3.0e-27 126.7 269 30.1
Manes.17G112600 Manihot esculenta HOM05D004386 ORTHO05D005247 5.2e-27 125.9 275 30.9
CsaV3_3G042780 Cucumis sativus L. HOM05D004386 ORTHO05D005247 1.2e-26 124.8 264 32.6
Gorai.007G075500 Gossypium raimondii HOM05D004386 ORTHO05D005247 1.2e-26 124.8 258 32.2
ClCG10G013910 Citrullus lanatus HOM05D004386 ORTHO05D005247 2.0e-26 124.0 264 32.6
Ciclev10014954m.g Citrus clementina HOM05D004386 ORTHO05D005247 2.0e-26 124.0 283 28.6
Gohir.D11G070400 Gossypium hirsutum HOM05D004386 ORTHO05D005247 2.0e-26 124.0 258 32.2
Thecc.04G016500 Theobroma cacao HOM05D004386 ORTHO05D005247 2.6e-26 123.6 270 30.0
BcaC06g33792 Brassica carinata HOM05D004386 ORTHO05D005247 5.7e-26 122.5 273 29.3
C07p36830 Brassica napus HOM05D004386 ORTHO05D005247 5.7e-26 122.5 273 29.3
BolC7t44196H Brassica oleracea HOM05D004386 ORTHO05D005247 5.7e-26 122.5 273 29.3
Sed0019384 Sechium edule HOM05D004386 ORTHO05D005247 1.3e-25 121.3 274 32.1
TPR.G14088 Trifolium pratense HOM05D004386 ORTHO05D005247 1.3e-25 121.3 271 31.7
Aqoxy5G03803 Aquilegia oxysepala HOM05D004386 ORTHO05D005247 1.7e-25 120.9 264 28.8
Manes.15G150000 Manihot esculenta HOM05D004386 ORTHO05D005247 1.7e-25 120.9 274 29.2
CANSAT64G0389 Cannabis sativa HOM05D004386 ORTHO05D005247 2.8e-25 120.2 270 31.1
PSO832G3302 Papaver somniferum HOM05D004386 ORTHO05D005247 2.8e-25 120.2 280 32.5
PGR083G0256 Punica granatum HOM05D004386 ORTHO05D005247 3.7e-25 119.8 274 29.6
TWI12G1386 Tripterygium wilfordii HOM05D004386 ORTHO05D005247 6.3e-25 119.0 282 29.4
Oeu057061.2 Olea europaea HOM05D004386 ORTHO05D005247 8.3e-25 118.6 136 47.8
Sp2g16770 Schrenkiella parvula HOM05D004386 ORTHO05D005247 8.3e-25 118.6 263 29.3
MELO3C026578.2 Cucumis melo HOM05D004386 ORTHO05D005247 1.1e-24 118.2 182 40.1
Psat1g054840 Pisum sativum HOM05D004386 ORTHO05D005247 1.1e-24 118.2 271 29.5
TAR374G1586 Trochodendron aralioides HOM05D004386 ORTHO05D005247 1.4e-24 117.9 280 29.3
EL10Ac4g07711 Beta vulgaris HOM05D004386 ORTHO05D005247 1.8e-24 117.5 269 30.1
A06p41010 Brassica napus HOM05D004386 ORTHO05D005247 2.4e-24 117.1 265 29.4
BraA06t27020Z Brassica rapa HOM05D004386 ORTHO05D005247 2.4e-24 117.1 265 29.4
PSO063G4583 Papaver somniferum HOM05D004386 ORTHO05D005247 4.1e-24 116.3 280 31.4
Glyma.19G005200 Glycine max HOM05D004386 ORTHO05D005247 7.0e-24 115.5 282 31.2
Medtr6g005220 Medicago truncatula HOM05D004386 ORTHO05D005247 7.0e-24 115.5 263 30.8
Lj2g0022197 Lotus japonicus HOM05D004386 ORTHO05D005247 9.1e-24 115.2 268 29.9
Sed0006302 Sechium edule HOM05D004386 ORTHO05D005247 1.6e-23 114.4 264 31.1
BraA09t35984Z Brassica rapa HOM05D004386 ORTHO05D005247 2.0e-23 114.0 266 28.9
A09p03460 Brassica napus HOM05D004386 ORTHO05D005247 2.7e-23 113.6 266 28.9
AUR62020360 Chenopodium quinoa HOM05D004386 ORTHO05D005247 2.7e-23 113.6 277 30.0
Phvul.004G010500 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 2.7e-23 113.6 269 30.1
AL5G17060 Arabidopsis lyrata HOM05D004386 ORTHO05D005247 3.5e-23 113.2 263 29.3
AUR62015863 Chenopodium quinoa HOM05D004386 ORTHO05D005247 3.5e-23 113.2 277 30.0
Ca_04168_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 4.5e-23 112.8 272 30.1
Lalb_Chr06g0175761 Lupinus albus HOM05D004386 ORTHO05D005247 4.5e-23 112.8 333 27.3
Phvul.007G112800 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 5.9e-23 112.5 271 30.3
Potri.001G345400 Populus trichocarpa HOM05D004386 ORTHO05D005247 5.9e-23 112.5 272 29.4
BcaC06g30967 Brassica carinata HOM05D004386 ORTHO05D005247 1.0e-22 111.7 269 29.0
CARHR149060 Cardamine hirsuta HOM05D004386 ORTHO05D005247 1.0e-22 111.7 263 29.3
Sc11g0004050 Simmondsia chinensis HOM05D004386 ORTHO05D005247 1.3e-22 111.3 270 27.4
Glyma.05G004600 Glycine max HOM05D004386 ORTHO05D005247 1.7e-22 110.9 282 30.5
vmacro05857 Vaccinium macrocarpon HOM05D004386 ORTHO05D005247 2.2e-22 110.5 322 27.0
Thhalv10004025m.g Eutrema salsugineum HOM05D004386 ORTHO05D005247 3.8e-22 109.8 262 29.8
Eucgr.J02238 Eucalyptus grandis HOM05D004386 ORTHO05D005247 5.0e-22 109.4 275 28.4
Lsat_1_v5_gn_0_39820 Lactuca sativa HOM05D004386 ORTHO05D005247 5.0e-22 109.4 181 36.5
Carub.0005s0608 Capsella rubella HOM05D004386 ORTHO05D005247 8.5e-22 108.6 263 28.5
HPP92_006408 Vanilla planifolia HOM05D004386 ORTHO05D005247 8.5e-22 108.6 272 29.8
Nitab4.5_0005022g0020 Nicotiana tabacum HOM05D004386 ORTHO05D005247 1.9e-21 107.5 312 26.3
AT3G27640 Arabidopsis thaliana HOM05D004386 ORTHO05D005247 2.5e-21 107.1 264 29.5
Sabra16G0224400 Salix brachista HOM05D004386 ORTHO05D005247 1.2e-20 104.8 286 30.1
COL.COLO4_29103 Corchorus olitorius HOM05D004386 ORTHO05D005247 1.6e-20 104.4 223 32.7
VMungo0464G0678 Vigna mungo HOM05D004386 ORTHO05D005247 2.1e-20 104.0 202 31.2
Hund23207 Selenicereus undatus HOM05D004386 ORTHO05D005247 3.6e-20 103.2 188 33.5
Rhsim10G0017900 Rhododendron simsii HOM05D004386 ORTHO05D005247 1.8e-19 100.9 254 30.3
Aa31LG2G5030 Aethionema arabicum HOM05D004386 ORTHO05D005247 3.0e-19 100.1 265 29.4
MBI16_g23842_MAGBIO Magnolia biondii HOM05D004386 ORTHO05D005247 6.8e-19 99.0 244 27.5
Medtr6g005920 Medicago truncatula HOM05D004386 ORTHO05D005247 2.0e-18 97.4 139 42.4
SGA_v2.0_scaffold481G52308 Striga asiatica HOM05D004386 ORTHO05D005247 8.3e-17 92.0 134 44.8
MSTRG.24035 Avicennia marina HOM05D004386 ORTHO05D005247 9.1e-16 88.6 118 41.5
BcaC06g30968 Brassica carinata HOM05D004386 ORTHO05D005247 9.1e-16 88.6 172 32.0
Prupe.3G290400 Prunus persica HOM05D004386 ORTHO05D005247 9.1e-16 88.6 118 39.8
Gohir.A11G066200 Gossypium hirsutum HOM05D004386 ORTHO05D005247 1.7e-14 84.3 121 41.3
SEGI_08021 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 5.0e-14 82.8 256 24.2
Ca_04167_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 1.9e-13 80.9 213 28.6
Ca_30239_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 1.9e-13 80.9 265 25.7
Zm00001eb053910 Zea mays HOM05D004386 ORTHO05D005247 7.2e-13 79.0 122 36.1
Mapoly0154s0005 Marchantia polymorpha HOM05D004386 ORTHO05D005247 1.6e-12 77.8 258 26.0
Pp3c15_21840 Physcomitrium patens HOM05D004386 ORTHO05D005247 4.7e-12 76.3 266 25.6
AagrBONN_evm.TU.Sc2ySwM_117.1179 Anthoceros agrestis HOM05D004386 ORTHO05D005247 8.0e-12 75.5 207 28.0
SHI16383 Sapria himalayana HOM05D004386 ORTHO05D005247 1.0e-11 75.1 48 62.5
ATR0585G118 Amborella trichopoda HOM05D004386 ORTHO05D005247 5.2e-11 72.8 202 25.7
Ca_11629_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 5.2e-11 72.8 139 32.4
Zm00001eb216890 Zea mays HOM05D004386 ORTHO05D005247 5.2e-11 72.8 48 64.6
CDE06G2157 Ceratophyllum demersum HOM05D004386 ORTHO05D005247 3.4e-10 70.1 272 24.6
HanXRQChr15g0474771 Helianthus annuus HOM05D004386 ORTHO05D005247 5.7e-10 69.3 45 68.9
MD17G1028100 Malus domestica HOM05D004386 ORTHO05D005247 2.2e-09 67.4 94 39.4
CBR_g29535 Chara braunii HOM05D004386 ORTHO05D005247 1.6e-07 61.2 176 26.1


User provided reference genes

Program Settings