Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 3.2e-87 325.1 168 100.0
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 2.9e-32 142.5 172 52.9
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.1e-26 124.0 141 55.3
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 4.1e-26 122.1 132 55.3
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 7.0e-26 121.3 169 47.9
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 1.2e-25 120.6 130 52.3
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.3e-24 117.1 146 46.6
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 1.7e-24 116.7 159 47.8
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 2.2e-24 116.3 146 46.6
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 6.5e-24 114.8 148 50.7
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.5e-23 113.6 174 41.4
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.5e-23 113.6 163 41.1
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 1.9e-23 113.2 150 44.0
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 1.9e-23 113.2 144 45.8
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 3.2e-23 112.5 146 45.9
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 3.2e-23 112.5 154 44.8
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 4.2e-23 112.1 135 46.7
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 4.2e-23 112.1 182 41.8
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 5.5e-23 111.7 156 43.6
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.5e-23 111.7 142 43.7
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 5.5e-23 111.7 142 43.7
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 5.5e-23 111.7 152 44.7
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 9.4e-23 110.9 187 39.6
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 9.4e-23 110.9 167 40.7
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.2e-22 110.5 164 43.9
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.7e-22 109.4 177 40.1
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 3.6e-22 109.0 153 45.8
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 4.7e-22 108.6 153 43.8
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 8.0e-22 107.8 174 42.5
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.0e-21 107.5 175 40.0
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 1.4e-21 107.1 160 38.8
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 6.8e-21 104.8 164 40.2
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 1.2e-20 104.0 139 43.2
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.4e-20 102.4 143 44.1
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 3.4e-20 102.4 140 41.4
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 5.7e-20 101.7 157 39.5
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 5.7e-20 101.7 154 42.2
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 7.5e-20 101.3 160 40.6
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 9.8e-20 100.9 152 39.5
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.3e-19 100.5 179 37.4
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.3e-19 100.5 144 45.8
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 1.7e-19 100.1 160 40.0
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.7e-19 100.1 141 43.3
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.2e-19 99.8 126 44.4
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 2.2e-19 99.8 151 39.7
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.8e-19 99.4 119 44.5
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 4.9e-19 98.6 150 37.3
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 4.9e-19 98.6 150 38.7
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 4.9e-19 98.6 156 40.4
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 4.9e-19 98.6 150 42.0
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 6.3e-19 98.2 155 40.0
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 1.1e-18 97.4 146 41.1
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 2.4e-18 96.3 162 37.0
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 3.1e-18 95.9 161 39.1
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.1e-18 95.9 155 38.1
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 4.1e-18 95.5 177 36.2
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 5.4e-18 95.1 162 35.2
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 5.4e-18 95.1 155 43.9
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 9.2e-18 94.4 189 37.6
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.2e-17 94.0 161 37.3
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 1.6e-17 93.6 170 38.2
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.6e-17 93.6 156 42.3
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.7e-17 92.8 179 38.0
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 2.7e-17 92.8 136 39.0
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 5.9e-17 91.7 126 46.8
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 7.7e-17 91.3 170 37.6
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 7.7e-17 91.3 170 37.6
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.0e-16 90.9 171 38.6
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.0e-16 90.9 171 38.6
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 1.0e-16 90.9 165 39.4
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 1.0e-16 90.9 160 38.1
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.3e-16 90.5 193 34.2
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.7e-16 90.1 159 37.1
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.7e-16 90.1 154 40.3
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 2.3e-16 89.7 194 35.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 2.3e-16 89.7 147 38.8
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 2.3e-16 89.7 153 37.9
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 2.9e-16 89.4 157 38.9
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 3.8e-16 89.0 156 35.9
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 5.0e-16 88.6 163 36.8
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 5.0e-16 88.6 150 39.3
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 8.6e-16 87.8 197 34.5
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.1e-15 87.4 167 37.1
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.5e-15 87.0 182 35.2
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 1.5e-15 87.0 131 38.2
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.9e-15 86.7 164 36.6
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 2.5e-15 86.3 144 33.3
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 2.5e-15 86.3 163 38.0
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.5e-15 86.3 200 31.5
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 4.3e-15 85.5 201 31.3
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.2e-14 84.0 144 35.4
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.2e-14 84.0 140 37.1
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 1.2e-14 84.0 149 34.9
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 2.1e-14 83.2 126 40.5
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 2.1e-14 83.2 211 30.3
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 3.6e-14 82.4 173 32.9
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 3.6e-14 82.4 147 38.1
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 3.6e-14 82.4 210 28.6
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 1.0e-13 80.9 184 34.2
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.4e-13 80.5 189 30.2
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.8e-13 80.1 147 34.7
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 2.3e-13 79.7 184 31.5
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 3.0e-13 79.3 134 40.3
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 3.0e-13 79.3 124 40.3
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 4.0e-13 79.0 187 33.7
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 5.2e-13 78.6 51 66.7
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 1.5e-12 77.0 200 29.5
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 2.0e-12 76.6 125 36.0
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.6e-12 76.3 190 32.6
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 2.6e-12 76.3 133 40.6
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 3.4e-12 75.9 181 33.1
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 4.4e-12 75.5 189 29.1
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 7.5e-12 74.7 151 35.8
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 1.3e-11 73.9 75 48.0
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 1.3e-11 73.9 75 48.0
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 1.7e-11 73.6 124 38.7
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 4.9e-11 72.0 145 43.4
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 6.4e-11 71.6 51 60.8
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 8.3e-11 71.2 209 28.2
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 1.1e-10 70.9 136 33.8
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.4e-10 70.5 171 34.5
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 4.1e-10 68.9 155 34.8
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 4.1e-10 68.9 185 32.4
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 1.2e-09 67.4 63 49.2
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.7e-09 66.2 73 46.6
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 3.5e-09 65.9 163 35.0
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 7.8e-09 64.7 195 26.7
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 7.8e-09 64.7 118 33.9
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 1.0e-08 64.3 143 35.0
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 1.3e-08 63.9 59 49.2
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 3.9e-08 62.4 188 25.5


User provided reference genes

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