Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 3.3e-118 428.3 210 100.0
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 4.7e-88 328.2 205 75.1
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 2.6e-86 322.4 202 73.8
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 6.4e-85 317.8 209 71.3
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 8.3e-85 317.4 202 73.3
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 1.5e-81 306.6 195 72.3
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 1.9e-81 306.2 202 70.8
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 4.3e-81 305.1 193 72.5
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 7.3e-81 304.3 206 69.4
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 2.1e-80 302.8 194 72.7
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 2.8e-80 302.4 195 71.8
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 6.2e-80 301.2 195 72.3
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 4.0e-79 298.5 195 70.8
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 6.8e-79 297.7 203 70.0
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 3.7e-77 292.0 197 69.5
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 4.1e-76 288.5 209 67.5
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 5.4e-76 288.1 200 70.0
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 1.2e-75 287.0 209 67.9
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 5.1e-74 281.6 201 68.2
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 5.1e-74 281.6 192 70.3
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 8.6e-74 280.8 202 65.8
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 2.5e-73 279.3 174 74.7
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 2.5e-73 279.3 192 70.3
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 3.3e-73 278.9 203 65.5
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 3.3e-73 278.9 203 65.5
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 7.3e-73 277.7 211 65.4
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 9.5e-73 277.3 192 68.8
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 1.2e-72 276.9 202 66.8
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 2.1e-72 276.2 207 66.2
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 2.8e-72 275.8 197 67.5
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 3.6e-72 275.4 203 68.5
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 6.2e-72 274.6 212 63.2
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 1.4e-71 273.5 196 65.8
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 1.8e-71 273.1 203 65.5
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 1.8e-71 273.1 205 63.9
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 3.1e-71 272.3 212 64.6
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 3.1e-71 272.3 203 66.5
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 5.2e-71 271.6 170 72.9
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 8.9e-71 270.8 203 66.0
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 1.2e-70 270.4 204 64.2
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.2e-70 270.4 203 67.0
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.2e-70 270.4 205 66.3
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.2e-70 270.4 202 65.8
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 2.0e-70 269.6 181 69.1
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 3.4e-70 268.9 204 63.2
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 4.4e-70 268.5 196 65.3
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 4.4e-70 268.5 198 67.2
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 5.8e-70 268.1 174 71.3
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 1.3e-69 266.9 224 61.2
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 1.3e-69 266.9 198 65.7
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 1.7e-69 266.5 204 63.7
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 2.2e-69 266.2 205 64.4
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.2e-69 266.2 207 63.8
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 2.2e-69 266.2 191 66.0
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 4.9e-69 265.0 187 69.0
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 4.9e-69 265.0 197 66.0
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 6.4e-69 264.6 197 69.0
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 6.4e-69 264.6 197 64.5
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 6.4e-69 264.6 202 64.4
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 6.4e-69 264.6 202 64.4
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 1.1e-68 263.8 201 68.7
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 1.1e-68 263.8 205 63.9
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 1.4e-68 263.5 180 68.3
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 1.4e-68 263.5 200 65.0
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 1.4e-68 263.5 200 65.0
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 1.9e-68 263.1 203 64.5
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 5.4e-68 261.5 198 61.6
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 7.1e-68 261.2 202 61.4
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 1.2e-67 260.4 200 63.0
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.2e-67 260.4 191 66.0
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 1.2e-67 260.4 193 62.7
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 1.6e-67 260.0 191 65.4
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 1.6e-67 260.0 195 66.7
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 2.1e-67 259.6 189 62.4
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 4.6e-67 258.5 198 62.1
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 6.0e-67 258.1 197 61.4
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 7.8e-67 257.7 195 65.1
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 2.3e-66 256.1 206 62.6
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 2.3e-66 256.1 201 63.2
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.0e-66 255.8 183 66.1
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 3.9e-66 255.4 170 68.8
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 5.1e-66 255.0 208 60.6
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 1.1e-65 253.8 193 63.2
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 1.9e-65 253.1 198 64.6
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 1.9e-65 253.1 198 62.6
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 5.6e-65 251.5 197 66.0
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 9.6e-65 250.8 166 71.7
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 9.6e-65 250.8 213 61.0
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 9.6e-65 250.8 213 61.0
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 9.6e-65 250.8 180 67.2
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 9.6e-65 250.8 203 59.1
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 9.6e-65 250.8 193 62.2
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 2.8e-64 249.2 168 67.3
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 2.8e-64 249.2 170 68.8
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 1.1e-63 247.3 165 69.7
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 2.4e-63 246.1 183 65.0
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 2.4e-63 246.1 209 60.3
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 5.2e-63 245.0 182 62.6
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 1.2e-62 243.8 178 65.7
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 2.0e-62 243.0 174 66.7
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 7.6e-62 241.1 146 76.7
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 7.6e-62 241.1 182 63.7
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 9.9e-62 240.7 174 62.1
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 2.9e-61 239.2 174 60.3
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 3.8e-61 238.8 153 73.9
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 1.9e-60 236.5 203 59.1
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 1.6e-59 233.4 178 62.4
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 2.3e-58 229.6 173 62.4
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 3.9e-58 228.8 190 60.0
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 1.5e-57 226.9 196 57.1
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 7.3e-57 224.6 190 59.5
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 7.3e-57 224.6 190 59.5
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 7.3e-57 224.6 190 59.5
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 4.8e-56 221.9 200 60.0
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 7.6e-54 214.5 166 58.4
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 1.2e-51 207.2 164 64.0
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 2.1e-51 206.5 314 41.7
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 2.8e-48 196.1 188 51.1
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 3.6e-48 195.7 192 50.0
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 8.1e-48 194.5 129 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 3.1e-47 192.6 167 53.3
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 9.0e-47 191.0 161 64.0
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 5.4e-44 181.8 162 60.5
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 1.3e-42 177.2 136 66.9
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 1.8e-39 166.8 163 48.5
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 2.9e-37 159.5 175 45.7
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 9.3e-36 154.5 168 51.2
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 7.4e-33 144.8 192 43.2
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.3e-32 144.1 159 48.4
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.8e-31 140.2 172 42.4
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.2e-30 137.5 175 44.6
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 7.1e-28 128.3 200 34.5
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 2.7e-27 126.3 170 41.2
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 3.3e-25 119.4 77 68.8
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 5.7e-17 92.0 63 58.7
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 6.5e-13 78.6 57 66.7
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 1.4e-12 77.4 66 51.5
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.3e-09 66.2 70 41.4
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 2.2e-08 63.5 153 29.4
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 6.3e-08 62.0 63 50.8


User provided reference genes

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