Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 1.0e-74 283.5 159 100.0
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 2.1e-27 126.3 156 57.1
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 3.1e-23 112.5 150 49.3
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 3.4e-22 109.0 166 46.4
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 3.8e-21 105.5 149 46.3
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.7e-18 96.7 168 42.3
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 1.7e-18 96.7 164 42.1
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.0e-18 95.9 163 42.3
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 1.9e-17 93.2 150 48.7
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 3.3e-17 92.4 165 44.2
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 3.3e-17 92.4 164 41.5
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 1.3e-16 90.5 159 44.7
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.3e-16 90.5 167 41.3
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 6.2e-16 88.2 165 41.2
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 6.2e-16 88.2 150 38.7
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 8.1e-16 87.8 154 43.5
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 4.0e-15 85.5 150 46.7
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 1.5e-14 83.6 173 38.7
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 2.6e-14 82.8 160 41.2
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 5.8e-14 81.6 166 40.4
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 7.6e-14 81.3 164 37.8
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.2e-13 79.7 151 39.7
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 2.9e-13 79.3 147 40.8
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 4.9e-13 78.6 161 39.1
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 4.9e-13 78.6 157 36.3
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 8.4e-13 77.8 152 38.8
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.9e-12 76.6 162 35.2
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 2.4e-12 76.3 147 42.9
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 2.4e-12 76.3 152 42.1
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 4.2e-12 75.5 162 38.3
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 7.1e-12 74.7 144 37.5
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 1.6e-11 73.6 143 37.1
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 2.7e-11 72.8 163 36.8
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 7.9e-11 71.2 161 33.5
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 2.3e-10 69.7 160 36.2
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 3.9e-10 68.9 144 36.1
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 3.9e-10 68.9 166 33.7
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 1.1e-09 67.4 153 39.9
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 1.9e-09 66.6 165 36.4
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 4.3e-09 65.5 164 35.4
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 9.6e-09 64.3 169 36.7
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 9.6e-09 64.3 164 35.4
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 2.1e-08 63.2 145 37.2
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 2.8e-08 62.8 148 36.5
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 3.6e-08 62.4 144 35.4
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 3.6e-08 62.4 153 37.9
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 4.8e-08 62.0 164 36.0
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 4.8e-08 62.0 169 36.7
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 2.4e-07 59.7 129 37.2
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 2.4e-07 59.7 129 37.2
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.1e-07 59.3 156 35.9
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 5.3e-07 58.5 155 36.1
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.3e-07 58.5 155 36.1
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 5.3e-07 58.5 184 33.7
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 6.9e-07 58.2 156 35.9
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 6.9e-07 58.2 123 38.2
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 6.9e-07 58.2 146 35.6
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 4.5e-06 55.5 173 36.4
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 9.9e-06 54.3 154 33.8


User provided reference genes

Program Settings