Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 4.4e-166 587.8 283 100.0
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.1e-119 433.7 260 79.2
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 7.7e-118 427.6 269 77.7
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 7.7e-118 427.6 259 77.6
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 8.5e-117 424.1 268 76.1
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 3.7e-112 408.7 263 71.9
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 6.3e-112 407.9 277 70.0
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.6e-110 403.3 273 69.6
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 4.5e-110 401.7 270 70.4
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 5.9e-110 401.4 270 70.4
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.7e-109 399.8 258 75.2
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 8.5e-109 397.5 261 72.0
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 4.2e-108 395.2 261 70.9
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 5.5e-108 394.8 261 70.9
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.4e-108 394.0 270 68.1
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.6e-107 393.3 254 72.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 1.6e-107 393.3 256 72.7
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 2.1e-107 392.9 256 73.0
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 2.1e-107 392.9 256 73.0
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 2.7e-107 392.5 257 72.0
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 6.1e-107 391.3 256 73.4
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.0e-106 390.6 256 72.3
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 1.4e-106 390.2 256 71.5
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 3.0e-106 389.0 256 73.4
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 5.2e-106 388.3 267 68.2
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.2e-105 387.1 269 68.0
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 1.5e-105 386.7 256 70.7
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.5e-105 386.7 255 71.0
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.0e-105 386.3 254 71.7
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 2.6e-105 386.0 256 72.7
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 3.3e-105 385.6 268 69.0
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 5.7e-105 384.8 269 67.7
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 9.7e-105 384.0 256 70.3
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 1.7e-104 383.3 256 71.1
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.2e-104 382.9 269 67.3
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 4.8e-104 381.7 270 68.9
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 6.3e-104 381.3 256 69.5
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 3.1e-103 379.0 256 68.8
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.1e-103 379.0 295 62.0
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 3.1e-103 379.0 256 71.5
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 1.2e-102 377.1 255 71.0
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.2e-102 377.1 269 68.4
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 3.5e-102 375.6 257 68.9
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 5.9e-102 374.8 256 69.9
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 5.9e-102 374.8 258 70.5
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 7.7e-102 374.4 271 68.6
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 5.0e-101 371.7 256 68.0
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 6.5e-101 371.3 257 70.8
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.1e-100 370.5 256 69.1
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.5e-100 370.2 255 70.2
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.9e-100 369.8 258 70.2
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.9e-100 369.8 256 69.1
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 4.2e-100 368.6 256 69.5
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 7.2e-100 367.9 256 68.8
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.1e-99 366.3 269 66.5
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 3.6e-99 365.5 276 65.6
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.7e-99 365.2 276 63.0
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 8.0e-99 364.4 258 68.2
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.4e-98 363.6 257 66.9
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 2.3e-98 362.8 253 68.4
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 6.8e-98 361.3 276 62.7
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 6.8e-98 361.3 258 65.5
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 2.0e-97 359.8 275 62.2
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 2.6e-97 359.4 256 67.6
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 3.4e-97 359.0 268 65.3
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 5.7e-97 358.2 253 66.8
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 9.8e-97 357.5 282 63.5
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 2.2e-96 356.3 308 60.4
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.8e-96 355.9 262 63.7
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.8e-96 355.9 279 62.4
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 4.8e-96 355.1 223 75.8
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 4.5e-94 348.6 256 64.1
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 2.3e-93 346.3 269 63.6
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 1.5e-92 343.6 255 68.2
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.9e-92 343.2 256 63.7
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.3e-92 342.4 270 62.2
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.2e-92 342.0 261 65.1
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.2e-91 340.5 260 61.5
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.2e-91 340.5 260 61.5
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 1.6e-91 340.1 260 61.5
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 6.1e-91 338.2 260 60.8
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.0e-90 337.4 258 62.0
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 2.3e-90 336.3 260 61.5
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 4.0e-90 335.5 260 61.2
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 4.1e-87 325.5 278 60.8
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 7.0e-87 324.7 255 63.5
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 5.0e-85 318.5 350 48.3
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.3e-84 315.5 271 59.0
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 2.1e-83 313.2 267 61.8
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 8.0e-83 311.2 206 71.4
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.2e-81 307.4 262 57.6
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 1.7e-80 303.5 205 69.3
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 3.7e-80 302.4 269 56.1
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 3.7e-80 302.4 252 57.1
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 5.4e-79 298.5 256 60.9
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.2e-78 297.4 260 55.4
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 2.1e-75 286.6 199 70.4
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 1.4e-74 283.9 264 51.1
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 2.6e-73 279.6 255 53.7
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 4.9e-72 275.4 391 44.2
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.4e-72 275.0 251 57.0
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.7e-64 250.4 207 59.9
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.1e-60 237.7 185 60.5
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 8.1e-59 231.5 327 40.1
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 7.1e-55 218.4 151 66.9
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 6.0e-54 215.3 162 61.1
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 7.3e-52 208.4 255 45.1
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 4.3e-44 182.6 151 57.0
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 7.3e-44 181.8 167 56.9
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 2.1e-38 163.7 107 68.2
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.0e-37 161.4 143 57.3
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 3.0e-37 159.8 119 61.3
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 4.0e-26 122.9 126 52.4
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 5.3e-26 122.5 263 30.4
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.8e-24 116.3 400 24.8
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.1e-18 98.2 71 66.2
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 6.9e-18 95.5 61 72.1
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.7e-13 79.0 52 69.2
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 9.4e-07 58.5 52 57.7
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 6.1e-06 55.8 41 58.5


User provided reference genes

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