Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold134G34684 Striga asiatica HOM05D018751 ORTHO05D012560 1.3e-107 392.9 182 100.0
SGA_v2.0_scaffold124G33587 Striga asiatica HOM05D018751 ORTHO05D012560 4.2e-101 371.3 182 95.6
SGA_v2.0_scaffold280G46866 Striga asiatica HOM05D018751 ORTHO05D012560 1.1e-93 346.7 182 92.3
SGA_v2.0_scaffold49G18173 Striga asiatica HOM05D018751 ORTHO05D012560 8.0e-60 234.2 177 67.2
EL10As7g23796 Beta vulgaris HOM05D000176 ORTHO05D000106 8.4e-17 91.3 151 35.8
EL10Ac2g04591 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-16 90.5 126 39.7
EL10Ac6g14750 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-16 90.5 126 39.7
EL10Ac6g15299 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-16 90.5 126 39.7
EL10Ac1g00589 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-16 90.1 126 39.7
EL10Ac3g07230 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-16 90.1 126 39.7
EL10Ac5g11477 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-16 90.1 126 39.7
EL10Ac1g01877 Beta vulgaris HOM05D018751 ORTHO05D012560 3.2e-16 89.4 137 36.5
EL10Ac4g08722 Beta vulgaris HOM05D000176 ORTHO05D012560 3.2e-16 89.4 135 37.8
EL10Ac2g02456 Beta vulgaris HOM05D000176 ORTHO05D000106 4.2e-16 89.0 126 39.7
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 9.3e-16 87.8 162 31.5
EL10Ac6g14325 Beta vulgaris HOM05D000176 ORTHO05D000106 2.7e-15 86.3 120 37.5
EL10Ac4g09361 Beta vulgaris HOM05D000176 ORTHO05D000106 3.5e-15 85.9 125 36.0
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.0e-14 82.8 174 30.5
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.0e-14 82.8 173 30.1
Ah.01g016330 Amaranthus hybridus HOM05D018751 ORTHO05D012560 3.9e-14 82.4 174 30.5
EL10Ac9g20851 Beta vulgaris HOM05D000176 ORTHO05D012560 1.3e-12 77.4 126 31.0
EL10Ac1g01147 Beta vulgaris HOM05D000176 ORTHO05D012560 1.6e-12 77.0 114 36.0
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-10 69.7 128 35.9
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-10 68.9 123 35.0
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-10 68.6 123 35.0
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-10 68.6 123 35.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-10 68.2 128 34.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-10 68.2 128 34.4
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-10 68.2 128 34.4
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 9.9e-10 67.8 123 34.1
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.7e-09 67.0 134 33.6
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-09 66.2 124 34.7
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-09 66.2 128 34.4
EL10Ac6g14181 Beta vulgaris HOM05D000176 ORTHO05D012560 3.8e-09 65.9 73 41.1
EL10Ac6g14384 Beta vulgaris HOM05D000176 ORTHO05D012560 3.8e-09 65.9 73 41.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-09 65.5 120 35.0
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 4.9e-09 65.5 118 35.6
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 8.4e-09 64.7 90 37.8
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 8.4e-09 64.7 108 38.9
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-08 64.3 85 38.8
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-08 63.5 129 34.9
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-08 62.0 111 34.2
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-08 62.0 121 33.1
EL10Ac7g17812 Beta vulgaris HOM05D000176 ORTHO05D000106 7.1e-08 61.6 86 37.2
PSO675G0665 Papaver somniferum HOM05D013701 ORTHO05D012560 7.1e-08 61.6 122 32.0
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 9.3e-08 61.2 81 38.3
EL10Ac2g04872 Beta vulgaris HOM05D000176 ORTHO05D000106 9.3e-08 61.2 81 38.3
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 9.3e-08 61.2 135 25.9
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-07 60.5 121 33.9
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.6e-07 60.5 113 32.7
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 60.1 109 31.2
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 60.1 109 31.2
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 60.1 109 31.2
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 60.1 121 30.6
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-07 59.7 109 31.2
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-07 59.7 111 33.3
PSO675G4184 Papaver somniferum HOM05D013701 ORTHO05D012560 2.7e-07 59.7 166 30.7
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 3.5e-07 59.3 117 29.9
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-07 58.9 121 33.1
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-07 58.9 129 34.9
EL10Ac1g02224 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 50 54.0
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 122 32.8
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 122 32.8
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 122 32.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 7.9e-07 58.2 118 33.9
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 1.0e-06 57.8 122 32.0
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 1.0e-06 57.8 63 44.4
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-06 57.8 122 31.1
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.3e-06 57.4 118 33.1
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.4 117 32.5
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.4 115 33.9
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.4 126 30.2
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.4 102 31.4
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-06 56.6 115 33.9
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-06 56.6 110 34.5
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-06 56.2 123 34.1
PSO063G0537 Papaver somniferum HOM05D000176 ORTHO05D000106 3.0e-06 56.2 95 34.7
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 3.9e-06 55.8 122 32.0
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-06 55.8 113 31.0
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 6.7e-06 55.1 119 31.9
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.7e-06 54.7 102 31.4
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.7e-06 54.7 102 32.4
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.7e-06 54.7 102 32.4


User provided reference genes

Program Settings