Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold134G34683 Striga asiatica HOM05D018757 ORTHO05D000562 2.5e-217 758.4 379 100.0
SGA_v2.0_scaffold280G46865 Striga asiatica HOM05D018757 ORTHO05D000562 8.1e-147 524.2 387 75.5
SGA_v2.0_scaffold124G33588 Striga asiatica HOM05D018757 ORTHO05D000562 3.0e-133 479.2 298 86.9
SGA_v2.0_scaffold224G42987 Striga asiatica HOM05D018757 ORTHO05D000562 1.9e-127 459.9 384 66.4
SGA_v2.0_scaffold15G07427 Striga asiatica HOM05D018757 ORTHO05D000562 1.5e-39 167.9 392 33.9
AUR62039874 Chenopodium quinoa HOM05D012566 ORTHO05D000562 5.6e-31 139.4 369 35.0
Ah.01g016220 Amaranthus hybridus HOM05D012566 ORTHO05D000562 5.2e-29 132.9 372 33.1
Ah.01g016390 Amaranthus hybridus HOM05D000593 ORTHO05D000562 6.8e-29 132.5 372 33.1
Ah.01g016320 Amaranthus hybridus HOM05D012566 ORTHO05D000562 5.8e-28 129.4 372 33.1
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 7.8e-25 119.0 395 28.4
AUR62008504 Chenopodium quinoa HOM05D012566 ORTHO05D000562 5.3e-21 106.3 316 31.0
EL10Ac2g02647 Beta vulgaris HOM05D000593 ORTHO05D000562 8.4e-19 99.0 329 28.6
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 1.1e-18 98.6 380 24.5
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-18 98.2 382 24.9
AUR62039530 Chenopodium quinoa HOM05D012566 ORTHO05D000562 3.2e-18 97.1 192 32.8
Ah.06g193770 Amaranthus hybridus HOM05D018757 ORTHO05D002268 4.2e-18 96.7 188 28.2
AUR62015704 Chenopodium quinoa HOM05D012566 ORTHO05D000562 4.2e-18 96.7 232 37.5
AUR62015706 Chenopodium quinoa HOM05D012566 ORTHO05D000562 4.2e-18 96.7 232 37.5
AUR62034795 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.2e-17 95.1 232 34.1
SGA_v2.0_scaffold59G20782 Striga asiatica HOM05D018757 ORTHO05D400267 1.2e-17 95.1 63 74.6
Ah.12g052860 Amaranthus hybridus HOM05D009642 ORTHO05D011683 3.5e-17 93.6 187 32.1
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 4.6e-17 93.2 379 24.3
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 3.3e-15 87.0 405 24.9
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.3e-15 87.0 405 24.9
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.3e-15 86.7 379 24.3
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 7.3e-15 85.9 399 23.3
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 2.8e-14 84.0 192 29.7
Ah.12g052880 Amaranthus hybridus HOM05D009642 ORTHO05D011683 2.8e-14 84.0 147 31.3
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-14 82.4 184 34.2
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-14 82.4 184 34.2
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-14 82.4 184 34.2
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 1.4e-13 81.6 184 33.7
AUR62022257 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.8e-13 81.3 188 29.8
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-13 80.9 184 33.7
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.2e-12 78.6 385 22.6
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 1.2e-12 78.6 190 28.4
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-12 78.2 348 23.9
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 2.0e-12 77.8 211 27.0
Migut.D01884 Erythranthe guttata HOM05D000593 ORTHO05D000562 5.8e-12 76.3 382 20.4
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.6e-12 75.9 193 26.9
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.9e-12 75.5 193 26.9
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-11 75.1 187 27.3
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.3e-11 75.1 199 27.1
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-11 74.3 359 24.5
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 2.9e-11 73.9 344 23.8
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 3.8e-11 73.6 342 21.6
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.9e-11 73.2 209 27.3
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 4.9e-11 73.2 192 27.6
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 4.9e-11 73.2 192 27.6
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 6.4e-11 72.8 193 26.4
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 6.4e-11 72.8 193 26.4
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 6.4e-11 72.8 200 26.0
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-10 72.0 187 27.3
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 1.1e-10 72.0 196 27.6
Ca_07719_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.9e-10 71.2 298 23.8
FvH4_3g04011 Fragaria vesca HOM05D000593 ORTHO05D000562 1.9e-10 71.2 289 22.8
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 2.4e-10 70.9 190 26.8
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 2.4e-10 70.9 191 25.7
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 5.4e-10 69.7 164 29.3
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 5.4e-10 69.7 164 28.7
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 5.4e-10 69.7 166 27.7
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 9.3e-10 68.9 186 27.4
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 9.3e-10 68.9 372 25.3
Gohir.D07G195440 Gossypium hirsutum HOM05D000593 ORTHO05D000562 1.2e-09 68.6 176 30.1
SGA_v2.0_scaffold162G37890 Striga asiatica HOM05D003216 ORTHO05D002268 1.2e-09 68.6 152 31.6
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.6e-09 68.2 186 31.2
Gorai.005G173000 Gossypium raimondii HOM05D000593 ORTHO05D000562 1.6e-09 68.2 106 36.8
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.6e-09 68.2 184 26.1
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-09 67.8 185 27.0
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 2.1e-09 67.8 158 29.7
Gorai.006G065500 Gossypium raimondii HOM05D000593 ORTHO05D000562 2.1e-09 67.8 106 37.7
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.7e-09 67.4 193 24.4
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 2.7e-09 67.4 345 23.5
Gohir.D02G153950 Gossypium hirsutum HOM05D000593 ORTHO05D000562 2.7e-09 67.4 112 36.6
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 2.7e-09 67.4 191 25.7
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 2.7e-09 67.4 198 25.3
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 3.5e-09 67.0 197 26.9
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 3.5e-09 67.0 164 28.0
HanXRQChr15g0483301 Helianthus annuus HOM05D000593 ORTHO05D002268 3.5e-09 67.0 104 36.5
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 6.0e-09 66.2 190 25.8
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 6.0e-09 66.2 201 24.9
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 6.0e-09 66.2 201 24.9
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-08 65.5 175 28.0
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-08 65.5 165 32.1
Gorai.008G062800 Gossypium raimondii HOM05D000593 ORTHO05D000562 1.3e-08 65.1 79 43.0
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 1.8e-08 64.7 171 26.3
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.8e-08 64.7 213 26.3
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.8e-08 64.7 192 24.5
ECA233G2800 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.3e-08 64.3 185 25.9
Gorai.004G152900 Gossypium raimondii HOM05D000593 ORTHO05D000562 2.3e-08 64.3 87 39.1
Gorai.010G106000 Gossypium raimondii HOM05D000593 ORTHO05D000562 2.3e-08 64.3 106 36.8
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 3.0e-08 63.9 170 29.4
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 3.9e-08 63.5 294 24.1
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 3.9e-08 63.5 163 26.4
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.9e-08 63.5 162 27.8
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 5.1e-08 63.2 194 26.3
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 5.1e-08 63.2 162 29.6
TWI12G1095 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-08 63.2 243 27.6
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-08 63.2 358 25.7
TWI12G0007 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.7e-08 62.8 243 27.6
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.7e-08 62.8 159 30.2
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.7e-08 62.8 154 29.9
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 8.7e-08 62.4 157 31.2
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 1.1e-07 62.0 142 29.6
ECA233G1330 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.1e-07 62.0 185 25.9
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.1e-07 62.0 375 20.5
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.1e-07 62.0 158 27.2
ECA248G1709 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.5e-07 61.6 185 25.4
Gorai.007G053200 Gossypium raimondii HOM05D000593 ORTHO05D000562 1.5e-07 61.6 99 37.4
TWI56G1041 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-07 61.6 295 26.4
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 1.9e-07 61.2 157 28.0
ECA233G4219 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.9e-07 61.2 195 24.6
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-07 61.2 172 30.2
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 2.5e-07 60.8 160 26.9
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.5e-07 60.8 160 26.9
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 3.3e-07 60.5 253 24.5
TWI79G0990 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.3e-07 60.5 260 24.2
ECA247G1059 Erigeron canadensis HOM05D000593 ORTHO05D002268 4.3e-07 60.1 170 27.1
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 4.3e-07 60.1 165 26.1
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 5.6e-07 59.7 100 32.0
Medtr2g034775 Medicago truncatula HOM05D003216 ORTHO05D002268 5.6e-07 59.7 109 31.2
ECA234G2373 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.4e-07 59.3 185 25.4
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.4e-07 59.3 344 24.1
ECA233G0180 Erigeron canadensis HOM05D000593 ORTHO05D000562 9.6e-07 58.9 185 24.9
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 9.6e-07 58.9 48 50.0
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 9.6e-07 58.9 159 27.7
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 9.6e-07 58.9 164 25.6
ECA238G0368 Erigeron canadensis HOM05D000609 ORTHO05D000462 1.3e-06 58.5 106 30.2
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-06 58.5 358 22.3
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.6e-06 58.2 192 24.5
ECA240G0778 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.6e-06 58.2 185 24.9
ECA247G3727 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.6e-06 58.2 170 26.5
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-06 57.8 191 24.6
ECA247G1992 Erigeron canadensis HOM05D000710 ORTHO05D000336 2.1e-06 57.8 150 27.3
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-06 57.8 153 28.8
TWI15G0719 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-06 57.8 286 28.7
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-06 57.8 192 24.5
ECA248G2535 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.8e-06 57.4 170 27.1
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 3.7e-06 57.0 109 31.2
TPR.G1696 Trifolium pratense HOM05D009380 ORTHO05D009933 3.7e-06 57.0 112 27.7
ECA247G3130 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 170 27.1
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 4.8e-06 56.6 165 25.5
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 4.8e-06 56.6 165 24.8
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 6.2e-06 56.2 106 31.1
ECA233G1670 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.2e-06 56.2 170 26.5
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.2e-06 56.2 192 24.5
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.2e-06 56.2 156 25.0
ECA238G3256 Erigeron canadensis HOM05D000593 ORTHO05D000562 8.1e-06 55.8 170 26.5
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 8.1e-06 55.8 48 47.9
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 8.1e-06 55.8 112 28.6
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 8.1e-06 55.8 58 43.1


User provided reference genes

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