Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.5e-122 443.0 242 100.0
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 6.4e-73 278.1 264 61.0
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.1e-61 240.7 263 54.4
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 5.8e-58 228.4 174 63.8
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 3.2e-56 222.6 243 49.8
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 1.2e-55 220.7 175 61.1
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 1.2e-55 220.7 173 63.0
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 6.1e-55 218.4 171 62.0
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 7.9e-55 218.0 257 47.1
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 1.0e-54 217.6 172 59.9
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 1.8e-54 216.9 174 59.8
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.8e-54 216.9 174 60.3
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 3.0e-54 216.1 171 61.4
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 3.9e-54 215.7 171 62.6
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 3.9e-54 215.7 180 59.4
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 3.9e-54 215.7 176 60.8
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 5.1e-54 215.3 214 58.4
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 1.5e-53 213.8 252 52.0
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 2.5e-53 213.0 254 48.0
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 2.5e-53 213.0 172 58.7
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 3.3e-53 212.6 254 46.9
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 4.3e-53 212.2 174 60.3
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 9.7e-53 211.1 168 61.3
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 9.7e-53 211.1 235 49.4
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 1.6e-52 210.3 175 60.0
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 2.2e-52 209.9 239 49.4
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 2.8e-52 209.5 250 47.6
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 2.8e-52 209.5 256 49.6
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 3.7e-52 209.1 182 58.2
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 4.8e-52 208.8 179 59.8
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 4.8e-52 208.8 179 59.2
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 4.8e-52 208.8 176 58.5
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 8.2e-52 208.0 173 60.1
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 8.2e-52 208.0 176 56.8
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 8.2e-52 208.0 181 56.9
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 8.2e-52 208.0 181 58.0
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.4e-51 207.2 175 58.3
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 2.4e-51 206.5 178 59.6
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.4e-51 206.5 174 60.3
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.2e-50 204.1 245 47.3
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.5e-50 203.8 181 52.5
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 1.5e-50 203.8 171 59.1
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.5e-50 203.8 171 57.3
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 1.5e-50 203.8 179 58.7
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 3.4e-50 202.6 168 58.3
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 4.5e-50 202.2 171 57.3
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 4.5e-50 202.2 171 57.3
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 5.9e-50 201.8 169 58.0
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 7.7e-50 201.4 172 57.6
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 7.7e-50 201.4 208 51.4
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 1.3e-49 200.7 172 57.0
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 2.2e-49 199.9 174 58.6
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 2.2e-49 199.9 172 59.3
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 5.0e-49 198.7 182 55.5
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 5.0e-49 198.7 173 55.5
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 8.5e-49 198.0 173 61.3
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 1.4e-48 197.2 245 46.5
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 1.9e-48 196.8 176 56.2
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 1.9e-48 196.8 173 61.3
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 1.9e-48 196.8 169 57.4
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 4.2e-48 195.7 173 61.8
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 4.2e-48 195.7 174 61.5
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 1.2e-47 194.1 171 59.6
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 1.2e-47 194.1 172 57.0
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 1.2e-47 194.1 169 56.2
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 2.7e-47 193.0 187 54.0
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 2.7e-47 193.0 187 54.0
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 2.7e-47 193.0 182 54.4
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 4.6e-47 192.2 179 54.2
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 7.9e-47 191.4 167 53.9
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 7.9e-47 191.4 187 53.5
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 1.0e-46 191.0 175 53.7
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 1.4e-46 190.7 187 53.5
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 1.8e-46 190.3 172 58.1
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 2.3e-46 189.9 172 53.5
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 3.9e-46 189.1 177 55.4
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 3.9e-46 189.1 177 55.4
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 3.9e-46 189.1 170 55.9
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 5.1e-46 188.7 170 56.5
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 6.7e-46 188.3 168 51.8
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 8.8e-46 188.0 172 55.8
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 2.0e-45 186.8 249 44.2
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 3.3e-45 186.0 236 47.0
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 4.3e-45 185.7 170 59.4
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 2.2e-44 183.3 172 54.7
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 2.8e-44 183.0 174 55.7
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 4.8e-44 182.2 254 42.5
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 1.3e-41 174.1 158 55.1
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 2.2e-41 173.3 169 53.8
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 2.9e-41 172.9 172 48.8
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 3.8e-41 172.6 281 39.5
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 5.0e-41 172.2 166 53.6
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 8.5e-41 171.4 157 56.7
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.9e-40 170.2 165 52.1
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 1.9e-40 170.2 169 50.9
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 1.2e-39 167.5 171 50.3
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 5.1e-38 162.2 160 51.2
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 2.2e-36 156.8 172 50.0
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 4.8e-36 155.6 158 50.6
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 4.8e-36 155.6 172 49.4
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 4.8e-36 155.6 172 49.4
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 9.1e-35 151.4 172 48.8
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 2.5e-32 143.3 119 53.8
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 2.5e-32 143.3 106 65.1
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 1.1e-29 134.4 114 62.3
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 2.8e-28 129.8 181 39.8
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 4.8e-28 129.0 173 41.0
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 5.3e-27 125.6 174 42.5
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 3.5e-26 122.9 122 54.1
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 5.9e-26 122.1 112 55.4
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 1.3e-25 120.9 191 36.1
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 5.0e-25 119.0 103 59.2
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 1.9e-24 117.1 166 41.6
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 2.8e-20 103.2 160 36.2
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 1.1e-19 101.3 180 40.6
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 4.5e-18 95.9 60 71.7
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 8.5e-17 91.7 128 44.5
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 1.9e-16 90.5 139 41.7
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 2.5e-16 90.1 172 38.4
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.4e-14 84.3 110 39.1
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 4.0e-14 82.8 56 64.3
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 3.8e-09 66.2 109 34.9
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.5e-08 64.3 62 45.2


User provided reference genes

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