Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 1.2e-64 249.6 122 100.0
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 1.7e-53 212.6 122 79.5
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 3.3e-49 198.4 113 79.6
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 3.7e-45 184.9 116 69.8
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 4.9e-45 184.5 112 72.3
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 2.4e-44 182.2 120 67.5
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 3.2e-44 181.8 116 67.2
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 4.1e-44 181.4 111 70.3
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 4.1e-44 181.4 118 69.5
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 4.1e-44 181.4 112 68.8
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 4.1e-44 181.4 112 68.8
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 4.1e-44 181.4 112 68.8
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 5.4e-44 181.0 120 65.8
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 5.4e-44 181.0 112 70.5
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 5.4e-44 181.0 116 67.2
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 7.1e-44 180.6 118 69.5
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 9.2e-44 180.3 120 68.3
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 2.1e-43 179.1 113 69.9
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 2.1e-43 179.1 120 65.8
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 2.7e-43 178.7 114 68.4
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 3.5e-43 178.3 119 67.2
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 6.0e-43 177.6 116 66.4
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 6.0e-43 177.6 116 66.4
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 6.0e-43 177.6 122 63.9
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 6.0e-43 177.6 116 64.7
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 7.8e-43 177.2 111 68.5
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 1.3e-42 176.4 117 68.4
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 1.3e-42 176.4 118 66.9
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 1.7e-42 176.0 122 63.9
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 1.7e-42 176.0 119 63.9
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 1.7e-42 176.0 117 66.7
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.7e-42 176.0 119 66.4
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.7e-42 176.0 119 64.7
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 2.3e-42 175.6 114 67.5
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 2.3e-42 175.6 116 66.4
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 2.3e-42 175.6 118 63.6
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 3.9e-42 174.9 111 68.5
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 3.9e-42 174.9 113 62.8
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 5.1e-42 174.5 116 66.4
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 5.1e-42 174.5 117 68.4
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 6.6e-42 174.1 118 63.6
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 8.6e-42 173.7 118 63.6
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 1.1e-41 173.3 111 67.6
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 1.1e-41 173.3 114 71.9
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 1.1e-41 173.3 119 62.2
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 1.5e-41 172.9 117 65.0
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 1.5e-41 172.9 119 63.0
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 1.5e-41 172.9 110 67.3
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 1.5e-41 172.9 112 67.0
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 1.5e-41 172.9 115 64.3
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 1.9e-41 172.6 116 63.8
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.9e-41 172.6 107 72.0
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 1.9e-41 172.6 112 68.8
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 2.5e-41 172.2 117 67.5
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.5e-41 172.2 107 71.0
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 2.5e-41 172.2 114 63.2
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 2.5e-41 172.2 117 67.5
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 3.3e-41 171.8 112 67.9
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 3.3e-41 171.8 116 66.4
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 5.6e-41 171.0 116 62.9
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 5.6e-41 171.0 115 67.8
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 1.2e-40 169.9 116 62.9
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 1.2e-40 169.9 118 61.9
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.2e-40 169.9 114 68.4
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 1.2e-40 169.9 112 67.0
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.6e-40 169.5 114 64.0
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.6e-40 169.5 117 66.7
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 1.6e-40 169.5 119 63.9
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 2.1e-40 169.1 116 66.4
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 4.7e-40 167.9 107 67.3
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 6.2e-40 167.5 119 62.2
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 1.1e-39 166.8 118 62.7
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.1e-39 166.8 106 68.9
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 1.1e-39 166.8 116 60.3
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 1.4e-39 166.4 111 65.8
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 1.8e-39 166.0 111 64.9
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 1.2e-38 163.3 107 64.5
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 2.6e-38 162.2 119 60.5
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 4.4e-38 161.4 119 57.1
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 4.4e-38 161.4 118 60.2
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 5.8e-38 161.0 111 63.1
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 2.2e-37 159.1 111 62.2
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 2.2e-37 159.1 111 62.2
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 2.2e-37 159.1 96 71.9
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 2.2e-37 159.1 112 65.2
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 6.4e-37 157.5 116 59.5
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 6.4e-37 157.5 116 57.8
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 1.9e-36 156.0 116 57.8
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 4.1e-36 154.8 96 67.7
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 7.1e-36 154.1 92 71.7
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 7.1e-36 154.1 96 69.8
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 7.1e-36 154.1 118 60.2
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 2.7e-35 152.1 94 69.1
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 3.5e-35 151.8 101 64.4
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 4.6e-35 151.4 109 58.7
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 1.0e-34 150.2 107 59.8
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 1.0e-34 150.2 103 65.0
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 2.3e-34 149.1 116 55.2
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 4.3e-33 144.8 116 53.4
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 9.6e-33 143.7 113 56.6
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 4.7e-32 141.4 112 54.5
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 4.7e-32 141.4 109 56.9
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 1.4e-31 139.8 84 72.6
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 4.8e-24 114.8 108 50.0
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 2.4e-23 112.5 102 51.0
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 9.9e-22 107.1 101 47.5
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 6.4e-21 104.4 67 65.7
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 8.4e-21 104.0 112 46.4
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 1.9e-20 102.8 67 65.7
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 6.0e-19 97.8 73 63.0
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 1.0e-18 97.1 53 77.4
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 8.7e-18 94.0 65 61.5
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.3e-17 92.0 67 64.2
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 9.6e-17 90.5 62 61.3
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 8.1e-16 87.4 97 43.3
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 3.2e-12 75.5 50 62.0
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.2e-11 73.6 48 62.5
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 3.5e-11 72.0 52 57.7


User provided reference genes

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