Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 1.7e-123 446.0 227 100.0
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 1.9e-111 406.0 226 93.4
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 2.3e-96 355.9 223 81.6
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 1.1e-93 347.1 226 77.0
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 3.1e-85 318.9 212 75.9
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 7.6e-76 287.7 226 65.0
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 1.7e-75 286.6 226 65.5
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 4.2e-74 282.0 232 63.8
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 5.5e-74 281.6 216 66.7
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 5.5e-74 281.6 214 65.9
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.6e-73 280.0 214 66.4
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 2.1e-73 279.6 223 63.2
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 2.7e-73 279.3 226 65.0
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 3.5e-73 278.9 226 62.4
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 1.3e-72 276.9 217 66.4
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 5.1e-72 275.0 212 66.5
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 6.7e-72 274.6 228 64.9
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 1.1e-71 273.9 214 65.4
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 1.9e-71 273.1 223 62.8
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 1.9e-71 273.1 222 63.1
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 4.3e-71 271.9 226 61.5
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 5.7e-71 271.6 222 64.0
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 1.6e-70 270.0 225 63.1
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 4.8e-70 268.5 215 64.7
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 6.2e-70 268.1 237 60.3
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 8.2e-70 267.7 225 61.8
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 1.4e-69 266.9 209 65.1
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 1.4e-69 266.9 217 63.1
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 3.1e-69 265.8 217 65.4
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 3.1e-69 265.8 221 62.4
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 3.1e-69 265.8 214 65.0
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 5.3e-69 265.0 222 61.7
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 9.0e-69 264.2 226 61.9
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.5e-68 263.5 221 62.9
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 2.6e-68 262.7 222 61.3
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 2.6e-68 262.7 222 61.7
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 3.4e-68 262.3 214 64.5
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 4.5e-68 261.9 212 66.0
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 1.0e-67 260.8 222 61.7
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 1.0e-67 260.8 228 62.3
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 1.0e-67 260.8 222 61.3
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 1.0e-67 260.8 228 62.3
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 1.0e-67 260.8 222 61.3
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 1.0e-67 260.8 226 61.9
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 1.3e-67 260.4 226 61.9
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 1.3e-67 260.4 212 61.8
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 1.7e-67 260.0 205 66.8
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 5.0e-67 258.5 225 60.0
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 6.5e-67 258.1 226 61.1
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 8.4e-67 257.7 215 63.7
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 3.2e-66 255.8 219 63.0
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 5.5e-66 255.0 225 61.8
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 5.5e-66 255.0 213 61.5
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 9.3e-66 254.2 226 61.5
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 1.2e-65 253.8 225 61.3
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 1.6e-65 253.4 216 63.0
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 2.1e-65 253.1 214 60.7
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.1e-65 253.1 214 60.7
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.1e-65 253.1 214 60.7
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.7e-65 252.7 226 58.4
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 2.7e-65 252.7 226 59.7
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 3.5e-65 252.3 221 59.7
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 3.5e-65 252.3 221 59.7
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 6.1e-65 251.5 226 59.7
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 7.9e-65 251.1 228 61.0
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 1.3e-64 250.4 220 59.5
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 1.8e-64 250.0 223 60.1
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 1.8e-64 250.0 213 62.9
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 2.3e-64 249.6 228 59.2
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 2.3e-64 249.6 252 54.0
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 3.0e-64 249.2 219 61.6
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 3.9e-64 248.8 213 62.9
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 5.1e-64 248.4 216 59.3
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 5.1e-64 248.4 212 59.9
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 6.7e-64 248.1 226 61.1
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 6.7e-64 248.1 220 58.6
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 8.7e-64 247.7 230 58.3
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 1.1e-63 247.3 217 61.3
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 1.5e-63 246.9 226 59.7
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 2.5e-63 246.1 217 62.2
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 3.3e-63 245.7 203 62.6
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 3.3e-63 245.7 213 62.4
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 4.3e-63 245.4 225 59.1
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 7.4e-63 244.6 230 57.0
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 2.8e-62 242.7 220 59.5
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 4.8e-62 241.9 218 58.3
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 8.2e-62 241.1 223 57.0
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 3.1e-61 239.2 213 61.0
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 4.1e-61 238.8 258 53.1
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 6.9e-61 238.0 225 56.4
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 9.0e-61 237.7 201 62.2
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 2.6e-60 236.1 220 55.9
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 5.9e-60 235.0 191 64.9
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 1.1e-58 230.7 187 63.6
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 1.1e-58 230.7 251 52.2
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 2.5e-58 229.6 186 62.4
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 9.4e-58 227.6 214 57.5
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 2.7e-57 226.1 226 50.4
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 3.6e-57 225.7 217 54.4
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 4.6e-57 225.3 225 54.2
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 4.6e-57 225.3 215 58.1
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 6.1e-57 224.9 206 56.3
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 3.3e-55 219.2 226 52.7
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 1.8e-53 213.4 198 55.6
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 9.1e-53 211.1 311 41.5
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 4.5e-52 208.8 223 54.7
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 2.9e-51 206.1 195 53.8
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 7.2e-50 201.4 195 52.3
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 7.9e-49 198.0 203 48.8
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.1e-45 187.6 195 53.3
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.8e-45 186.8 201 51.7
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 1.8e-45 186.8 156 62.2
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 7.0e-45 184.9 215 46.5
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 2.9e-43 179.5 158 61.4
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 3.6e-41 172.6 230 46.1
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 5.7e-39 165.2 149 58.4
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 2.2e-38 163.3 155 56.8
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 8.5e-35 151.4 176 50.6
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 1.1e-34 151.0 229 36.7
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 3.6e-33 146.0 206 37.4
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 2.4e-29 133.3 177 44.1
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 7.7e-28 128.3 206 37.9
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.8e-22 109.8 78 69.2
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 4.9e-22 109.0 89 58.4
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 1.7e-19 100.5 224 28.6
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 3.8e-19 99.4 87 58.6
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 1.1e-18 97.8 74 62.2
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.6e-17 94.0 81 56.8
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 8.9e-16 88.2 185 33.5
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 5.7e-15 85.5 221 26.2
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 9.8e-15 84.7 64 70.3
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 1.3e-14 84.3 60 68.3
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 3.0e-11 73.2 63 61.9
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.9e-10 70.5 47 68.1
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 2.8e-09 66.6 111 33.3
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.0e-07 60.5 65 49.2


User provided reference genes

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