Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34452 Striga asiatica HOM05D007325 ORTHO05D009251 1.1e-50 203.0 105 100.0
Oeu061920.1 Olea europaea HOM05D007325 ORTHO05D009251 1.4e-16 89.7 101 53.5
PGSC0003DMG400018232 Solanum tuberosum HOM05D007325 ORTHO05D009251 4.5e-15 84.7 92 55.4
Cc02_g36910 Coffea canephora HOM05D007325 ORTHO05D009251 8.5e-14 80.5 68 61.8
Lj5P313T22 Lonicera japonica HOM05D007325 ORTHO05D009251 2.5e-13 79.0 77 53.2
Migut.B00680 Erythranthe guttata HOM05D007325 ORTHO05D009251 7.2e-13 77.4 59 64.4
Manes.08G105900 Manihot esculenta HOM05D007325 ORTHO05D009251 7.2e-13 77.4 103 46.6
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 1.2e-12 76.6 85 51.8
Lsat_1_v5_gn_9_83741 Lactuca sativa HOM05D007325 ORTHO05D009251 1.8e-11 72.8 66 48.5
Manes.09G182800 Manihot esculenta HOM05D007325 ORTHO05D009251 3.0e-11 72.0 96 45.8
PGR119G2017 Punica granatum HOM05D007325 ORTHO05D009251 3.0e-11 72.0 79 54.4
SalBow6G6911 Salvia bowleyana HOM05D007325 ORTHO05D009251 1.2e-10 70.1 82 51.2
Ciclev10030031m.g Citrus clementina HOM05D007325 ORTHO05D009251 4.4e-10 68.2 68 52.9
Lj9P239T47 Lonicera japonica HOM05D007325 ORTHO05D009251 4.4e-10 68.2 66 51.5
Potri.005G000700 Populus trichocarpa HOM05D007325 ORTHO05D009251 4.4e-10 68.2 68 54.4
Sopen01g044880 Solanum pennellii HOM05D007325 ORTHO05D009251 4.4e-10 68.2 84 52.4
MD12G1197000 Malus domestica HOM05D007325 ORTHO05D009251 1.7e-09 66.2 69 55.1
Carub.0006s2420 Capsella rubella HOM05D007325 ORTHO05D009251 2.2e-09 65.9 75 50.7
Dinv30961 Davidia involucrata HOM05D007325 ORTHO05D009251 2.2e-09 65.9 87 46.0
THA.LOC104822290 Tarenaya hassleriana HOM05D007325 ORTHO05D009251 2.2e-09 65.9 77 50.6
Thecc.05G331600 Theobroma cacao HOM05D007325 ORTHO05D009251 3.7e-09 65.1 70 54.3
Prupe.6G302100 Prunus persica HOM05D007325 ORTHO05D009251 4.9e-09 64.7 69 53.6
TAR365G1009 Trochodendron aralioides HOM05D007325 ORTHO05D009251 4.9e-09 64.7 81 49.4
VMungo1383G0662 Vigna mungo HOM05D007325 ORTHO05D009251 4.9e-09 64.7 99 42.4
Gohir.D13G117300 Gossypium hirsutum HOM05D007325 ORTHO05D009251 1.4e-08 63.2 69 50.7
Thhalv10022316m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 1.8e-08 62.8 70 52.9
Gohir.A13G114400 Gossypium hirsutum HOM05D007325 ORTHO05D009251 1.8e-08 62.8 69 50.7
Phvul.001G220700 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 1.8e-08 62.8 83 43.4
Sp3g04850 Schrenkiella parvula HOM05D007325 ORTHO05D009251 1.8e-08 62.8 66 54.5
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 4.1e-08 61.6 55 52.7
BcaC01g04310 Brassica carinata HOM05D007325 ORTHO05D009251 4.1e-08 61.6 70 51.4
C03p41860 Brassica napus HOM05D007325 ORTHO05D009251 4.1e-08 61.6 70 51.4
BolC3t16469H Brassica oleracea HOM05D007325 ORTHO05D009251 4.1e-08 61.6 70 51.4
CANSAT54G2629 Cannabis sativa HOM05D007325 ORTHO05D009251 4.1e-08 61.6 77 46.8
Sed0022272 Sechium edule HOM05D007325 ORTHO05D009251 4.1e-08 61.6 77 53.2
Atru.chr12.1499 Acer truncatum HOM05D007325 ORTHO05D009251 7.0e-08 60.8 77 49.4
arahy.Tifrunner.gnm1.ann1.Y42B53 Arachis hypogaea HOM05D007325 ORTHO05D009251 7.0e-08 60.8 61 49.2
HanXRQChr04g0108581 Helianthus annuus HOM05D007325 ORTHO05D009251 7.0e-08 60.8 66 51.5
MBI18_g28938_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 1.2e-07 60.1 44 68.2
CSS0011097 Camellia sinensis var. sinensis HOM05D007325 ORTHO05D009251 1.6e-07 59.7 77 46.8
Gorai.013G131900 Gossypium raimondii HOM05D007325 ORTHO05D009251 1.6e-07 59.7 69 49.3
Glyma.03G226900 Glycine max HOM05D007325 ORTHO05D009251 2.7e-07 58.9 69 46.4
Potri.005G000401 Populus trichocarpa HOM05D007325 ORTHO05D009251 3.5e-07 58.5 76 46.1
Lalb_Chr04g0260261 Lupinus albus HOM05D007325 ORTHO05D009251 4.5e-07 58.2 53 54.7
MD04G1183600 Malus domestica HOM05D007325 ORTHO05D009251 4.5e-07 58.2 69 50.7
Glyma.20G089800 Glycine max HOM05D007325 ORTHO05D009251 5.9e-07 57.8 46 60.9
Psat6g156800 Pisum sativum HOM05D007325 ORTHO05D009251 5.9e-07 57.8 49 57.1
ATR0693G152 Amborella trichopoda HOM05D007325 ORTHO05D009251 1.0e-06 57.0 52 50.0
Glyma.10G141100 Glycine max HOM05D007325 ORTHO05D009251 1.0e-06 57.0 46 60.9
Lj1g0016832 Lotus japonicus HOM05D007325 ORTHO05D009251 1.0e-06 57.0 78 42.3
TPR.G3077 Trifolium pratense HOM05D007325 ORTHO05D009251 1.0e-06 57.0 49 57.1
TAR365G0322 Trochodendron aralioides HOM05D007325 ORTHO05D009251 1.0e-06 57.0 42 69.0
Eucgr.H01350 Eucalyptus grandis HOM05D007325 ORTHO05D009251 1.3e-06 56.6 82 43.9
Lj5g0004840 Lotus japonicus HOM05D007325 ORTHO05D009251 1.3e-06 56.6 71 49.3
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 2.3e-06 55.8 55 50.9
MBI18_g03881_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 2.3e-06 55.8 46 60.9
Thhalv10005170m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 2.9e-06 55.5 41 63.4
Lalb_Chr02g0147341 Lupinus albus HOM05D007325 ORTHO05D009251 2.9e-06 55.5 75 41.3
Medtr1g085240 Medicago truncatula HOM05D007325 ORTHO05D009251 2.9e-06 55.5 46 58.7
Oeu006910.1 Olea europaea HOM05D007325 ORTHO05D009251 2.9e-06 55.5 79 45.6
RcHm_v2.0_Chr3g0459051 Rosa chinensis HOM05D007325 ORTHO05D009251 2.9e-06 55.5 69 50.7
Phvul.007G207000 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 3.8e-06 55.1 46 58.7
PGR031G0924 Punica granatum HOM05D007325 ORTHO05D009251 3.8e-06 55.1 38 68.4
QL03p011419 Quercus lobata HOM05D007325 ORTHO05D009251 3.8e-06 55.1 52 57.7
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 3.8e-06 55.1 46 58.7
AL3G16720 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 5.0e-06 54.7 86 44.2
Lalb_Chr06g0167201 Lupinus albus HOM05D007325 ORTHO05D009251 5.0e-06 54.7 43 60.5
FAN09G1210 Fragaria x ananassa HOM05D007325 ORTHO05D009251 6.6e-06 54.3 69 47.8
Eucgr.B01357 Eucalyptus grandis HOM05D007325 ORTHO05D009251 8.6e-06 53.9 38 65.8


User provided reference genes

Program Settings