Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 0.0e+00 1333.9 731 100.0
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 6.3e-297 1023.8 733 78.7
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 7.9e-292 1006.9 731 77.2
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.0e-270 936.8 732 71.4
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.6e-263 912.9 732 69.4
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 3.8e-254 881.7 732 67.3
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 1.9e-253 879.4 731 67.0
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.6e-253 877.9 735 66.7
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 9.5e-253 877.1 732 67.3
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 6.1e-252 874.4 735 66.3
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.0e-251 872.1 761 65.2
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 5.2e-251 871.3 732 67.5
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 7.5e-250 867.5 753 65.2
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 1.6e-247 859.8 733 66.0
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 5.9e-247 857.8 732 66.3
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.8e-243 846.3 732 64.9
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 4.0e-243 845.1 732 65.6
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 2.6e-242 842.4 735 65.0
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 6.4e-241 837.8 734 64.2
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 6.0e-239 831.2 734 64.4
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 2.3e-238 829.3 819 59.7
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 2.3e-238 829.3 713 65.9
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.9e-238 828.6 734 64.6
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 3.9e-238 828.6 735 63.8
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 8.6e-238 827.4 732 63.8
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 1.1e-237 827.0 673 68.8
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.4e-235 820.1 732 64.8
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 8.9e-235 817.4 738 63.6
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 2.6e-234 815.8 731 63.2
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 4.4e-234 815.1 734 65.1
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 2.9e-233 812.4 721 63.2
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 6.4e-233 811.2 734 63.5
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.4e-232 809.3 737 62.8
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 4.1e-232 808.5 733 63.6
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 6.0e-231 804.7 733 63.3
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 1.9e-229 799.7 696 64.8
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 3.3e-229 798.9 732 62.2
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 7.3e-229 797.7 732 63.1
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.6e-228 796.6 734 62.7
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 4.7e-228 795.0 736 61.3
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 8.1e-228 794.3 706 62.9
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.8e-227 793.1 732 62.2
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.2e-226 790.4 739 61.8
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 5.8e-226 788.1 734 61.3
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 9.9e-226 787.3 741 61.1
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 1.3e-225 786.9 730 61.1
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 3.7e-225 785.4 735 60.3
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 2.4e-224 782.7 735 61.1
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.4e-224 782.7 674 64.5
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 9.2e-224 780.8 739 62.1
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.6e-223 780.0 674 64.1
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 4.6e-223 778.5 672 65.3
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.0e-222 777.3 737 60.8
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.7e-222 776.5 734 60.6
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 2.5e-221 772.7 735 60.7
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 5.6e-221 771.5 821 57.2
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 9.6e-221 770.8 730 60.5
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 2.1e-220 769.6 734 60.9
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 2.1e-220 769.6 732 61.3
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 3.1e-219 765.8 733 60.6
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 3.1e-219 765.8 733 61.3
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 4.9e-217 758.4 732 60.4
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 8.4e-217 757.7 734 60.1
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.2e-216 755.7 732 60.7
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 4.6e-215 751.9 735 60.0
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 2.5e-213 746.1 732 58.5
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 4.3e-213 745.3 734 59.4
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 7.3e-213 744.6 732 59.2
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.3e-212 743.8 742 58.8
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 3.4e-210 735.7 734 59.0
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 3.4e-210 735.7 734 59.0
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 2.2e-209 733.0 729 59.9
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.9e-209 732.6 703 60.2
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 3.0e-206 722.6 705 59.1
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.1e-206 721.8 803 55.3
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 3.1e-203 712.6 734 59.1
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.6e-199 700.3 733 58.0
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.1e-199 699.9 734 56.0
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 4.6e-199 698.7 732 56.3
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.8e-198 696.8 703 58.7
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 1.1e-197 694.1 675 61.3
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 4.8e-196 688.7 754 54.6
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 2.4e-195 686.4 705 57.9
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.7e-193 680.2 670 59.9
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.9e-189 666.8 736 55.4
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 2.1e-183 646.7 734 53.1
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 1.1e-181 641.0 748 52.3
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 1.3e-180 637.5 785 50.8
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 6.3e-172 608.6 733 51.0
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 6.3e-156 555.4 734 47.7
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 2.7e-154 550.1 596 56.2
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.0e-145 521.5 578 52.9
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.6e-135 487.6 364 72.8
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.8e-131 474.2 360 70.3
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.9e-128 464.2 562 51.4
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 3.9e-121 439.9 433 59.6
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.4e-118 431.4 302 75.5
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 2.0e-117 427.6 272 83.8
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 3.4e-117 426.8 593 49.1
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 2.4e-115 420.6 432 58.6
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 9.9e-109 398.7 380 62.1
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.3e-89 335.1 696 34.9
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.4e-83 314.3 345 56.2
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 1.2e-82 312.0 272 66.9
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 6.9e-78 296.2 454 45.4
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.6e-77 294.3 670 32.1
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.1e-75 288.9 671 31.4
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.0e-73 280.8 502 40.8
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 1.1e-72 278.9 374 49.2
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.6e-69 267.7 697 31.3
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 9.3e-67 259.2 709 29.9
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 3.0e-65 254.2 658 34.5
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.4e-32 144.4 138 60.1
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 1.5e-27 129.0 102 66.7
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.9e-27 128.6 84 70.2
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.4e-22 112.5 144 49.3
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 7.0e-22 110.2 510 24.7
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 4.7e-18 97.4 146 39.7
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.8e-17 95.5 104 50.0
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 1.2e-16 92.8 109 47.7
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.2e-15 88.6 178 40.4
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.2e-14 84.7 137 39.4
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.0e-14 83.6 54 83.3
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 2.7e-13 81.6 118 39.8
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 6.0e-13 80.5 238 31.5
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 6.0e-13 80.5 93 45.2
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 7.8e-13 80.1 70 60.0
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 6.6e-12 77.0 106 50.0
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.5e-11 75.1 67 59.7
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 3.6e-10 71.2 56 66.1
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.7e-07 61.2 41 78.0


User provided reference genes

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