Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34407 Striga asiatica HOM05D001103 ORTHO05D000954 3.0e-274 948.0 497 100.0
SGA_v2.0_scaffold7G03704 Striga asiatica HOM05D001103 ORTHO05D000954 1.3e-14 85.5 71 66.2
SalBow8G1018 Salvia bowleyana HOM05D001103 ORTHO05D000954 1.3e-11 75.5 51 74.5
MSTRG.16045 Avicennia marina HOM05D001103 ORTHO05D000954 3.8e-11 73.9 58 63.8
Lj2C258T10 Lonicera japonica HOM05D001103 ORTHO05D000954 3.8e-11 73.9 58 63.8
Migut.M01437 Erythranthe guttata HOM05D001103 ORTHO05D000954 4.9e-11 73.6 58 67.2
Sopen11g007390 Solanum pennellii HOM05D001103 ORTHO05D000954 6.5e-11 73.2 58 65.5
CAN.G1156.9 Capsicum annuum HOM05D001103 ORTHO05D000954 1.4e-10 72.0 58 63.8
Hma1.2p1_1963F.1_g309300 Hydrangea macrophylla HOM05D001103 ORTHO05D000954 1.4e-10 72.0 58 63.8
Nitab4.5_0000147g0280 Nicotiana tabacum HOM05D001103 ORTHO05D000954 1.4e-10 72.0 65 56.9
Solyc11g012660.2 Solanum lycopersicum HOM05D001103 ORTHO05D000954 1.4e-10 72.0 58 63.8
QL05p068135 Quercus lobata HOM05D001103 ORTHO05D000954 1.9e-10 71.6 58 63.8
Rhsim13G0142100 Rhododendron simsii HOM05D001103 ORTHO05D000954 2.5e-10 71.2 58 63.8
TWI38G1918 Tripterygium wilfordii HOM05D001103 ORTHO05D000954 2.5e-10 71.2 65 56.9
Oeu052844.3 Olea europaea HOM05D001103 ORTHO05D000954 3.2e-10 70.9 58 63.8
Potri.006G018000 Populus trichocarpa HOM05D001103 ORTHO05D000954 3.2e-10 70.9 58 63.8
Dinv15360 Davidia involucrata HOM05D001103 ORTHO05D000954 4.2e-10 70.5 58 62.1
PGSC0003DMG401013295 Solanum tuberosum HOM05D001103 ORTHO05D000954 5.5e-10 70.1 58 63.8
CSS0027324 Camellia sinensis var. sinensis HOM05D001103 ORTHO05D000954 7.1e-10 69.7 58 62.1
Oeu047046.3 Olea europaea HOM05D001103 ORTHO05D000954 7.1e-10 69.7 58 60.3
DCAR_002237 Daucus carota HOM05D001103 ORTHO05D000954 9.3e-10 69.3 58 62.1
Oeu057026.6 Olea europaea HOM05D001103 ORTHO05D000954 9.3e-10 69.3 58 62.1
Actinidia02291 Actinidia chinensis HOM05D001103 ORTHO05D000954 1.2e-09 68.9 58 62.1
Peaxi162Scf00008g00212 Petunia axillaris HOM05D001103 ORTHO05D000954 1.6e-09 68.6 57 63.2
Atru.chr1.2301_Atru.chr1.2302 Acer truncatum HOM05D001103 ORTHO05D000954 2.1e-09 68.2 58 62.1
Atru.chr1.2306 Acer truncatum HOM05D001103 ORTHO05D000954 2.1e-09 68.2 58 62.1
Cfa000048 Carpinus fangiana HOM05D001103 ORTHO05D000954 2.1e-09 68.2 58 62.1
Manes.09G078100 Manihot esculenta HOM05D001103 ORTHO05D000954 2.1e-09 68.2 58 60.3
Ca_21000_v3 Cicer arietinum L. HOM05D001103 ORTHO05D000954 2.7e-09 67.8 58 60.3
Gorai.010G189900 Gossypium raimondii HOM05D001103 ORTHO05D000954 2.7e-09 67.8 58 62.1
Oeu052863.3 Olea europaea HOM05D001103 ORTHO05D000954 2.7e-09 67.8 58 62.1
Peaxi162Scf01544g00022 Petunia axillaris HOM05D001103 ORTHO05D000954 2.7e-09 67.8 51 68.6
Thecc.06G238600 Theobroma cacao HOM05D001103 ORTHO05D000954 2.7e-09 67.8 59 64.4
CAN.G1263.27 Capsicum annuum HOM05D001103 ORTHO05D000954 3.5e-09 67.4 55 61.8
Cc09_g00500 Coffea canephora HOM05D001103 ORTHO05D000954 3.5e-09 67.4 58 60.3
Haze_07005 Corylus avellana HOM05D001103 ORTHO05D000954 3.5e-09 67.4 58 60.3
Glyma.17G006600 Glycine max HOM05D001103 ORTHO05D000954 3.5e-09 67.4 71 50.7
Gohir.A06G154800 Gossypium hirsutum HOM05D001103 ORTHO05D000954 3.5e-09 67.4 58 60.3
Lj4g0015594 Lotus japonicus HOM05D001103 ORTHO05D000954 3.5e-09 67.4 71 50.7
Potri.016G006900 Populus trichocarpa HOM05D001103 ORTHO05D000954 4.6e-09 67.0 58 62.1
Glyma.07G267400 Glycine max HOM05D001103 ORTHO05D000954 6.0e-09 66.6 71 52.1
Sabra06G0013100 Salix brachista HOM05D001103 ORTHO05D000954 6.0e-09 66.6 58 60.3
TAR626G0007 Trochodendron aralioides HOM05D001103 ORTHO05D000954 6.0e-09 66.6 58 60.3
Aqoxy4G02254 Aquilegia oxysepala HOM05D001103 ORTHO05D000954 7.9e-09 66.2 58 56.9
CiPaw.10G080600 Carya illinoinensis HOM05D001103 ORTHO05D000954 7.9e-09 66.2 58 58.6
Eucgr.E03882 Eucalyptus grandis HOM05D001103 ORTHO05D000954 7.9e-09 66.2 58 58.6
arahy.Tifrunner.gnm1.ann1.8JYA65 Arachis hypogaea HOM05D001103 ORTHO05D000954 1.0e-08 65.9 58 58.6
TWI63G1352 Tripterygium wilfordii HOM05D001103 ORTHO05D000954 1.0e-08 65.9 58 58.6
CiPaw.10G080900 Carya illinoinensis HOM05D001103 ORTHO05D000954 1.3e-08 65.5 58 60.3
ECA234G2924 Erigeron canadensis HOM05D001103 ORTHO05D000954 1.3e-08 65.5 58 58.6
Gohir.D06G162700 Gossypium hirsutum HOM05D001103 ORTHO05D000954 1.3e-08 65.5 58 60.3
arahy.Tifrunner.gnm1.ann1.B43GKP Arachis hypogaea HOM05D001103 ORTHO05D018483 1.8e-08 65.1 83 43.4
HanXRQChr16g0516401 Helianthus annuus HOM05D001103 ORTHO05D000954 1.8e-08 65.1 58 55.2
vmacro03620 Vaccinium macrocarpon HOM05D001103 ORTHO05D000954 1.8e-08 65.1 58 58.6
Cpa.g.sc27.245 Carica papaya HOM05D001103 ORTHO05D000954 3.0e-08 64.3 58 55.2
CsaV3_6G048290 Cucumis sativus L. HOM05D001103 ORTHO05D000954 3.0e-08 64.3 58 58.6
Duzib192G0471 Durio zibethinus HOM05D001103 ORTHO05D000954 3.0e-08 64.3 59 62.7
Nitab4.5_0004646g0050 Nicotiana tabacum HOM05D001103 ORTHO05D000954 3.9e-08 63.9 67 50.7
Lalb_Chr18g0057171 Lupinus albus HOM05D001103 ORTHO05D000954 5.1e-08 63.5 58 56.9
Nn1g03203 Nelumbo nucifera HOM05D001103 ORTHO05D000954 5.1e-08 63.5 58 55.2
Sabra16G0011800 Salix brachista HOM05D001103 ORTHO05D000954 5.1e-08 63.5 58 62.1
Prupe.4G005400 Prunus persica HOM05D001103 ORTHO05D000954 6.7e-08 63.2 58 56.9
Glyma.09G013100 Glycine max HOM05D001103 ORTHO05D000954 1.1e-07 62.4 71 47.9
Glyma.15G118000 Glycine max HOM05D001103 ORTHO05D000954 1.1e-07 62.4 71 47.9
Gohir.A05G175700 Gossypium hirsutum HOM05D001103 ORTHO05D000954 1.1e-07 62.4 58 53.4
Lsat_1_v5_gn_4_63560 Lactuca sativa HOM05D001103 ORTHO05D000954 1.1e-07 62.4 58 53.4
Lj6g0025885 Lotus japonicus HOM05D001103 ORTHO05D000954 1.1e-07 62.4 71 49.3
MBI16_g22431_MAGBIO Magnolia biondii HOM05D001103 ORTHO05D000954 1.1e-07 62.4 58 53.4
Medtr4g133890 Medicago truncatula HOM05D001103 ORTHO05D000954 1.1e-07 62.4 58 53.4
Nitab4.5_0001668g0080 Nicotiana tabacum HOM05D001103 ORTHO05D000954 1.1e-07 62.4 46 67.4
Phvul.003G086000 Phaseolus vulgaris HOM05D001103 ORTHO05D000954 1.1e-07 62.4 58 53.4
Sed0002320 Sechium edule HOM05D001103 ORTHO05D000954 1.1e-07 62.4 58 56.9
Gohir.D05G178800 Gossypium hirsutum HOM05D001103 ORTHO05D000954 1.5e-07 62.0 58 53.4
PSO675G3477 Papaver somniferum HOM05D001103 ORTHO05D000954 1.5e-07 62.0 58 56.9
Sc05g0009790 Simmondsia chinensis HOM05D001103 ORTHO05D000954 1.5e-07 62.0 58 53.4
CANSAT56G0682 Cannabis sativa HOM05D001103 ORTHO05D000954 1.9e-07 61.6 58 53.4
Ciclev10014697m.g Citrus clementina HOM05D001103 ORTHO05D000954 1.9e-07 61.6 57 57.9
Sed0000441 Sechium edule HOM05D001103 ORTHO05D000954 3.3e-07 60.8 58 56.9
arahy.Tifrunner.gnm1.ann1.31M0G5 Arachis hypogaea HOM05D001103 ORTHO05D000954 4.3e-07 60.5 57 56.1
arahy.Tifrunner.gnm1.ann1.P0XMJJ Arachis hypogaea HOM05D001103 ORTHO05D000954 4.3e-07 60.5 58 53.4
Duzib235G0778 Durio zibethinus HOM05D001103 ORTHO05D000954 4.3e-07 60.5 58 55.2
SEGI_28991 Sequoiadendron giganteum HOM05D001103 ORTHO05D000954 4.3e-07 60.5 58 53.4
GSVIVG01003492001 Vitis vinifera HOM05D001103 ORTHO05D000954 4.3e-07 60.5 58 55.2
Manes.08G070200 Manihot esculenta HOM05D001103 ORTHO05D000954 5.7e-07 60.1 58 53.4
PGSC0003DMG400015004 Solanum tuberosum HOM05D001103 ORTHO05D000954 5.7e-07 60.1 46 63.0
arahy.Tifrunner.gnm1.ann1.PTXY5H Arachis hypogaea HOM05D001103 ORTHO05D000954 7.4e-07 59.7 58 51.7
Phvul.006G140300 Phaseolus vulgaris HOM05D001103 ORTHO05D000954 7.4e-07 59.7 58 51.7
AUR62021823 Chenopodium quinoa HOM05D001103 ORTHO05D000954 9.7e-07 59.3 58 48.3
FAN21G2597 Fragaria x ananassa HOM05D001103 ORTHO05D000954 9.7e-07 59.3 58 55.2
EL10Ac8g20252 Beta vulgaris HOM05D001103 ORTHO05D000954 1.3e-06 58.9 58 50.0
ClCG01G021290 Citrullus lanatus HOM05D001103 ORTHO05D000954 1.3e-06 58.9 51 62.7
FvH4_3g00480 Fragaria vesca HOM05D001103 ORTHO05D000954 1.3e-06 58.9 58 53.4
PSO541G5050 Papaver somniferum HOM05D001103 ORTHO05D000954 1.3e-06 58.9 58 55.2
AUR62012836 Chenopodium quinoa HOM05D001103 ORTHO05D000954 1.6e-06 58.5 58 48.3
BcaB03g14020 Brassica carinata HOM05D001103 ORTHO05D000954 2.2e-06 58.2 59 49.2
MD00G1056800 Malus domestica HOM05D001103 ORTHO05D000954 2.2e-06 58.2 58 48.3
Os12g0640900 Oryza sativa ssp. japonica HOM05D001103 ORTHO05D000954 2.2e-06 58.2 58 51.7
RcHm_v2.0_Chr5g0000651 Rosa chinensis HOM05D001103 ORTHO05D000954 2.2e-06 58.2 58 53.4
Solyc04g015010.4 Solanum lycopersicum HOM05D001103 ORTHO05D000954 2.2e-06 58.2 46 60.9
Sopen04g007030 Solanum pennellii HOM05D001103 ORTHO05D000954 2.2e-06 58.2 46 60.9
TPR.G5955 Trifolium pratense HOM05D001103 ORTHO05D000954 2.2e-06 58.2 69 46.4
PGR031G2998 Punica granatum HOM05D001103 ORTHO05D000954 2.8e-06 57.8 64 48.4
Zm00001eb133890 Zea mays HOM05D001103 ORTHO05D000954 2.8e-06 57.8 58 51.7
Zm00001eb280250 Zea mays HOM05D001103 ORTHO05D000954 3.7e-06 57.4 61 49.2
arahy.Tifrunner.gnm1.ann1.354MLN Arachis hypogaea HOM05D002828 ORTHO05D000954 4.8e-06 57.0 58 50.0
CiPaw.09G107700 Carya illinoinensis HOM05D001103 ORTHO05D000954 4.8e-06 57.0 46 60.9
ATR0827G114 Amborella trichopoda HOM05D001103 ORTHO05D000954 6.3e-06 56.6 58 48.3
TPR.G10586 Trifolium pratense HOM05D001103 ORTHO05D000954 6.3e-06 56.6 58 48.3
Zm00001eb371500 Zea mays HOM05D001103 ORTHO05D000954 6.3e-06 56.6 58 51.7
COL.COLO4_31925 Corchorus olitorius HOM05D001103 ORTHO05D000954 8.2e-06 56.2 58 50.0
Gohir.D04G186300 Gossypium hirsutum HOM05D001103 ORTHO05D000954 8.2e-06 56.2 58 50.0
Gorai.012G182700 Gossypium raimondii HOM05D001103 ORTHO05D000954 8.2e-06 56.2 58 50.0
TWI74G1136 Tripterygium wilfordii HOM05D001103 ORTHO05D000954 8.2e-06 56.2 58 50.0
TWI77G0007 Tripterygium wilfordii HOM05D001103 ORTHO05D000954 8.2e-06 56.2 58 50.0


User provided reference genes

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