Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34400 Striga asiatica HOM05D005881 ORTHO05D007298 5.3e-90 334.3 170 100.0
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 4.1e-26 122.1 78 76.9
DCAR_001713 Daucus carota HOM05D005881 ORTHO05D007298 2.1e-25 119.8 79 74.7
Oeu010217.3 Olea europaea HOM05D005881 ORTHO05D007298 6.6e-24 114.8 78 70.5
CiPaw.06G026000 Carya illinoinensis HOM05D005881 ORTHO05D007298 8.6e-24 114.4 75 76.0
Migut.O00861 Erythranthe guttata HOM05D005881 ORTHO05D007298 1.5e-23 113.6 72 72.2
Oeu003780.1 Olea europaea HOM05D005881 ORTHO05D007298 1.9e-23 113.2 78 69.2
Haze_07862 Corylus avellana HOM05D005881 ORTHO05D007298 3.3e-23 112.5 78 73.1
Haze_12831 Corylus avellana HOM05D005881 ORTHO05D007298 3.3e-23 112.5 78 73.1
Eucgr.K01416 Eucalyptus grandis HOM05D005881 ORTHO05D007298 3.3e-23 112.5 67 77.6
Manes.10G110680 Manihot esculenta HOM05D005881 ORTHO05D007298 3.3e-23 112.5 75 73.3
QL02p102397 Quercus lobata HOM05D005881 ORTHO05D007298 3.3e-23 112.5 76 75.0
QL02p103034 Quercus lobata HOM05D005881 ORTHO05D007298 3.3e-23 112.5 76 75.0
Hma1.2p1_0052F.1_g029890 Hydrangea macrophylla HOM05D005881 ORTHO05D007298 4.3e-23 112.1 68 76.5
Peaxi162Scf00450g00736 Petunia axillaris HOM05D005881 ORTHO05D007298 5.6e-23 111.7 69 75.4
Cfa026049 Carpinus fangiana HOM05D005881 ORTHO05D007298 7.3e-23 111.3 88 63.6
Solyc01g103190.3 Solanum lycopersicum HOM05D005881 ORTHO05D007298 7.3e-23 111.3 69 75.4
Sopen01g045620 Solanum pennellii HOM05D005881 ORTHO05D007298 7.3e-23 111.3 69 75.4
CAN.G855.36 Capsicum annuum HOM05D005881 ORTHO05D007298 9.6e-23 110.9 69 73.9
Migut.N00857 Erythranthe guttata HOM05D005881 ORTHO05D007298 9.6e-23 110.9 72 70.8
Cfa026039 Carpinus fangiana HOM05D005881 ORTHO05D007298 1.2e-22 110.5 78 71.8
Nitab4.5_0001057g0140 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.2e-22 110.5 69 76.8
Sopen01g045600 Solanum pennellii HOM05D005881 ORTHO05D007298 1.2e-22 110.5 69 75.4
Haze_20435 Corylus avellana HOM05D005881 ORTHO05D007298 2.1e-22 109.8 74 75.7
CsaV3_3G006580 Cucumis sativus L. HOM05D005881 ORTHO05D007298 2.1e-22 109.8 65 76.9
vmacro19838 Vaccinium macrocarpon HOM05D005881 ORTHO05D007298 2.1e-22 109.8 71 71.8
Prupe.1G582900 Prunus persica HOM05D005881 ORTHO05D007298 2.8e-22 109.4 71 70.4
Glyma.11G208400 Glycine max HOM05D005881 ORTHO05D007298 3.6e-22 109.0 65 76.9
Glyma.18G045400 Glycine max HOM05D005881 ORTHO05D007298 3.6e-22 109.0 65 76.9
Manes.07G028000 Manihot esculenta HOM05D005881 ORTHO05D007298 3.6e-22 109.0 67 76.1
AL3G11760 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 4.7e-22 108.6 64 75.0
CSS0041173 Camellia sinensis var. sinensis HOM05D005881 ORTHO05D007298 4.7e-22 108.6 64 76.6
ClCG10G007340 Citrullus lanatus HOM05D005881 ORTHO05D007298 4.7e-22 108.6 65 76.9
Sed0016149 Sechium edule HOM05D005881 ORTHO05D007298 4.7e-22 108.6 65 75.4
Aa31LG6G3200 Aethionema arabicum HOM05D005881 ORTHO05D007298 6.2e-22 108.2 67 71.6
Aqoxy1G00234 Aquilegia oxysepala HOM05D005881 ORTHO05D007298 6.2e-22 108.2 71 73.2
AT4G21192 Arabidopsis thaliana HOM05D005881 ORTHO05D007298 6.2e-22 108.2 64 75.0
Cc02_g34860 Coffea canephora HOM05D005881 ORTHO05D007298 6.2e-22 108.2 71 70.4
Potri.004G227500 Populus trichocarpa HOM05D005881 ORTHO05D007298 6.2e-22 108.2 73 69.9
MD09G1270200 Malus domestica HOM05D005881 ORTHO05D007298 8.1e-22 107.8 73 68.5
Nitab4.5_0001057g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 8.1e-22 107.8 64 79.7
Nitab4.5_0002546g0080 Nicotiana tabacum HOM05D005881 ORTHO05D007298 8.1e-22 107.8 64 79.7
PSO017G1314 Papaver somniferum HOM05D005881 ORTHO05D007298 8.1e-22 107.8 70 72.9
PSO407G0212 Papaver somniferum HOM05D005881 ORTHO05D007298 8.1e-22 107.8 64 78.1
Zm00001eb244030 Zea mays HOM05D005881 ORTHO05D007298 8.1e-22 107.8 71 71.8
AL7G32920 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 1.1e-21 107.5 64 75.0
arahy.Tifrunner.gnm1.ann1.8HB0N1 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.1e-21 107.5 65 73.8
COL.COLO4_17857 Corchorus olitorius HOM05D005881 ORTHO05D007298 1.1e-21 107.5 67 73.1
CANSAT54G2245 Cannabis sativa HOM05D005881 ORTHO05D007298 1.4e-21 107.1 71 71.8
Ciclev10002996m.g Citrus clementina HOM05D005881 ORTHO05D007298 1.4e-21 107.1 67 71.6
PSO170G3105 Papaver somniferum HOM05D005881 ORTHO05D007298 1.8e-21 106.7 70 71.4
Duzib052G1237 Durio zibethinus HOM05D005881 ORTHO05D007298 2.4e-21 106.3 67 71.6
Lsat_1_v5_gn_9_121521 Lactuca sativa HOM05D005881 ORTHO05D007298 2.4e-21 106.3 64 75.0
Rhsim11G0129900 Rhododendron simsii HOM05D005881 ORTHO05D007298 2.4e-21 106.3 60 81.7
Sc07g0003630 Simmondsia chinensis HOM05D005881 ORTHO05D007298 2.4e-21 106.3 73 68.5
THA.LOC104812459 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 2.4e-21 106.3 67 71.6
CARHR227780 Cardamine hirsuta HOM05D005881 ORTHO05D007298 3.1e-21 105.9 64 73.4
Cfa021151 Carpinus fangiana HOM05D005881 ORTHO05D007298 3.1e-21 105.9 74 73.0
MD17G1268300 Malus domestica HOM05D005881 ORTHO05D007298 3.1e-21 105.9 73 65.8
arahy.Tifrunner.gnm1.ann1.6Q1IVA Arachis hypogaea HOM05D005881 ORTHO05D007298 4.0e-21 105.5 65 73.8
arahy.Tifrunner.gnm1.ann1.GZL8T6 Arachis hypogaea HOM05D005881 ORTHO05D007298 4.0e-21 105.5 65 73.8
Lj6g0001713 Lotus japonicus HOM05D005881 ORTHO05D007298 4.0e-21 105.5 65 73.8
Gohir.1Z049413 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.2e-21 105.1 67 71.6
Gohir.1Z049621 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.2e-21 105.1 67 71.6
Lalb_Chr18g0053871 Lupinus albus HOM05D005881 ORTHO05D007298 5.2e-21 105.1 65 75.4
MBI06_g43454_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 5.2e-21 105.1 71 71.8
TWI79G0203 Tripterygium wilfordii HOM05D005881 ORTHO05D007298 5.2e-21 105.1 67 70.1
Atru.chr6.354 Acer truncatum HOM05D005881 ORTHO05D007298 6.9e-21 104.8 67 68.7
arahy.Tifrunner.gnm1.ann1.VTJ29R Arachis hypogaea HOM05D005881 ORTHO05D007298 6.9e-21 104.8 65 73.8
Carub.0007s2023 Capsella rubella HOM05D005881 ORTHO05D007298 6.9e-21 104.8 64 71.9
Gohir.D10G000200 Gossypium hirsutum HOM05D005881 ORTHO05D007298 6.9e-21 104.8 67 70.1
Thecc.02G037800 Theobroma cacao HOM05D005881 ORTHO05D007298 6.9e-21 104.8 67 71.6
A08p15220 Brassica napus HOM05D005881 ORTHO05D007298 8.9e-21 104.4 63 73.0
Gohir.A01G140426 Gossypium hirsutum HOM05D005881 ORTHO05D007298 8.9e-21 104.4 67 70.1
Gorai.002G000700 Gossypium raimondii HOM05D005881 ORTHO05D007298 8.9e-21 104.4 67 71.6
RcHm_v2.0_Chr7g0222581 Rosa chinensis HOM05D005881 ORTHO05D007298 8.9e-21 104.4 67 70.1
Sp7g19280 Schrenkiella parvula HOM05D005881 ORTHO05D007298 8.9e-21 104.4 64 70.3
AUR62022918 Chenopodium quinoa HOM05D005881 ORTHO05D007298 1.2e-20 104.0 64 71.9
ECA246G1780 Erigeron canadensis HOM05D005881 ORTHO05D007298 1.2e-20 104.0 67 73.1
Thhalv10026658m.g Eutrema salsugineum HOM05D005881 ORTHO05D007298 1.2e-20 104.0 64 70.3
Gohir.1Z049721 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.2e-20 104.0 81 64.2
THA.LOC104812941 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.2e-20 104.0 67 68.7
unitig_22.g6105 Utricularia gibba HOM05D005881 ORTHO05D007298 1.2e-20 104.0 68 70.6
BcaC01g00708 Brassica carinata HOM05D005881 ORTHO05D007298 1.5e-20 103.6 64 70.3
BolC3t20627H Brassica oleracea HOM05D005881 ORTHO05D007298 1.5e-20 103.6 64 70.3
BraA08t33500Z Brassica rapa HOM05D005881 ORTHO05D007298 1.5e-20 103.6 64 70.3
Gohir.A01G000500 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.5e-20 103.6 67 70.1
FvH4_5g29590 Fragaria vesca HOM05D005881 ORTHO05D007298 2.0e-20 103.2 65 70.8
Os02g0560450 Oryza sativa ssp. japonica HOM05D005881 ORTHO05D007298 2.6e-20 102.8 71 67.6
Ah.00g001370 Amaranthus hybridus HOM05D005881 ORTHO05D007298 3.4e-20 102.4 64 73.4
Medtr3g064240 Medicago truncatula HOM05D005881 ORTHO05D007298 3.4e-20 102.4 65 70.8
Nn2g11943 Nelumbo nucifera HOM05D005881 ORTHO05D007298 3.4e-20 102.4 67 70.1
TPR.G37331 Trifolium pratense HOM05D005881 ORTHO05D007298 3.4e-20 102.4 65 72.3
C03p83470 Brassica napus HOM05D005881 ORTHO05D007298 4.4e-20 102.1 64 68.8
Gorai.011G000600 Gossypium raimondii HOM05D005881 ORTHO05D007298 4.4e-20 102.1 63 73.0
MBI06_g45555_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 4.4e-20 102.1 67 74.6
PGR042G2514 Punica granatum HOM05D005881 ORTHO05D007298 4.4e-20 102.1 67 68.7
TAR623G1668 Trochodendron aralioides HOM05D005881 ORTHO05D007298 5.8e-20 101.7 67 71.6
BraA03t14343Z Brassica rapa HOM05D005881 ORTHO05D007298 9.9e-20 100.9 64 70.3
HanXRQChr17g0543881 Helianthus annuus HOM05D005881 ORTHO05D007298 9.9e-20 100.9 70 68.6
A03p52690 Brassica napus HOM05D005881 ORTHO05D007298 1.3e-19 100.5 64 70.3
CDE08G1319 Ceratophyllum demersum HOM05D005881 ORTHO05D007298 1.3e-19 100.5 72 66.7
EL10Ac2g04867 Beta vulgaris HOM05D005881 ORTHO05D007298 1.7e-19 100.1 64 70.3
BcaC06g30655 Brassica carinata HOM05D005881 ORTHO05D007298 1.7e-19 100.1 64 70.3
BcaNung00865 Brassica carinata HOM05D005881 ORTHO05D007298 2.9e-19 99.4 68 69.1
C07p51120 Brassica napus HOM05D005881 ORTHO05D007298 2.9e-19 99.4 68 69.1
BolC7t45612H Brassica oleracea HOM05D005881 ORTHO05D007298 2.9e-19 99.4 68 69.1
Gohir.1Z049575 Gossypium hirsutum HOM05D005881 ORTHO05D007298 2.9e-19 99.4 61 73.8
Gorai.002G000900 Gossypium raimondii HOM05D005881 ORTHO05D007298 2.9e-19 99.4 61 73.8
GSVIVG01023198001 Vitis vinifera HOM05D005881 ORTHO05D007298 1.4e-18 97.1 67 65.7
Haze_10676 Corylus avellana HOM05D005881 ORTHO05D007298 9.3e-18 94.4 72 70.8
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 1.2e-17 94.0 71 67.6
Rhsim06G0200500 Rhododendron simsii HOM05D005881 ORTHO05D007298 1.6e-17 93.6 63 68.3
Haze_09300 Corylus avellana HOM05D005881 ORTHO05D007298 2.1e-17 93.2 72 70.8
Gohir.1Z049313 Gossypium hirsutum HOM05D005881 ORTHO05D007298 2.7e-17 92.8 57 73.7
FAN18G0030 Fragaria x ananassa HOM05D005881 ORTHO05D007298 3.5e-17 92.4 82 56.1
PGSC0003DMG400024874 Solanum tuberosum HOM05D005881 ORTHO05D007298 3.5e-17 92.4 104 49.0
Mapoly0035s0117 Marchantia polymorpha HOM05D005881 ORTHO05D007298 3.3e-15 85.9 62 62.9
HPP92_009201 Vanilla planifolia HOM05D005881 ORTHO05D007298 3.3e-15 85.9 49 83.7
Gohir.1Z049675 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.3e-14 84.0 47 72.3
AagrBONN_evm.TU.Sc2ySwM_117.2390 Anthoceros agrestis HOM05D005881 ORTHO05D007298 5.3e-13 78.6 63 55.6
Phvul.006G085400 Phaseolus vulgaris HOM05D005881 ORTHO05D007298 2.6e-12 76.3 39 74.4
MELO3C032219.2 Cucumis melo HOM05D005881 ORTHO05D007298 4.9e-11 72.0 68 45.6
MBI06_g35042_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.6e-09 67.0 61 57.4
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 3.5e-09 65.9 39 66.7
BcaC02g10665 Brassica carinata HOM05D005881 ORTHO05D007298 3.5e-09 65.9 37 67.6
C04p26430 Brassica napus HOM05D005881 ORTHO05D007298 3.5e-09 65.9 37 67.6
BolC4t24162H Brassica oleracea HOM05D005881 ORTHO05D007298 3.5e-09 65.9 37 67.6
EL10Ac4g07780 Beta vulgaris HOM05D000065 ORTHO05D002939 4.6e-09 65.5 40 67.5
EL10Ac4g07877 Beta vulgaris HOM05D005881 ORTHO05D007298 4.6e-09 65.5 40 67.5
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 6.0e-09 65.1 38 68.4
SHI38298 Sapria himalayana HOM05D005881 ORTHO05D000001 3.0e-08 62.8 47 59.6
EL10Ac7g16281 Beta vulgaris HOM05D005881 ORTHO05D007298 5.1e-08 62.0 41 58.5
Nitab4.5_0001129g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.1e-07 60.8 42 76.2


User provided reference genes

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