Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 3.8e-310 1067.4 564 100.0
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 4.2e-208 728.4 572 69.9
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.2e-181 640.6 690 55.7
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 8.2e-180 634.4 572 61.2
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.6e-173 612.8 572 58.9
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 4.4e-173 612.1 572 58.2
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 4.8e-172 608.6 572 57.9
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 5.4e-171 605.1 575 59.7
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 2.3e-169 599.7 572 57.3
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 8.3e-164 581.3 590 57.5
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 4.5e-162 575.5 575 58.1
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 5.0e-161 572.0 575 56.3
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.9e-160 570.1 574 56.4
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 5.6e-160 568.5 493 65.1
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.6e-159 567.0 575 55.7
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.4e-158 563.9 573 55.7
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.3e-158 563.1 573 56.0
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 5.2e-158 562.0 575 55.1
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 5.2e-158 562.0 573 55.3
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.2e-157 560.8 599 55.6
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.4e-157 558.9 599 55.4
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 5.8e-157 558.5 575 54.3
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 5.8e-157 558.5 573 55.7
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 9.8e-157 557.8 573 55.1
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 1.3e-156 557.4 570 55.4
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 4.9e-156 555.4 573 55.1
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 6.4e-156 555.1 574 54.0
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.9e-155 553.5 570 54.7
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 5.4e-155 552.0 575 54.8
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 9.2e-155 551.2 575 55.1
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.2e-154 550.8 575 55.0
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.6e-154 550.4 575 55.1
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 6.0e-154 548.5 575 55.1
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 3.0e-153 546.2 572 55.2
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 6.6e-153 545.0 570 53.5
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.5e-152 543.9 587 55.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 1.9e-152 543.5 574 52.8
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 1.2e-151 540.8 568 54.0
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.6e-151 540.4 575 53.9
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 1.1e-150 537.7 576 53.8
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.4e-150 537.3 568 53.2
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.8e-150 537.0 578 53.3
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.8e-150 537.0 571 53.8
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 2.3e-150 536.6 569 53.1
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.2e-150 535.4 573 51.8
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 1.5e-149 533.9 573 51.8
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.5e-149 533.9 583 52.0
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 5.8e-149 531.9 570 52.5
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.7e-148 530.4 578 53.6
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 8.3e-148 528.1 609 52.2
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.1e-147 527.7 578 52.2
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 4.1e-147 525.8 573 53.9
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 6.0e-146 521.9 578 52.9
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 6.0e-146 521.9 578 52.9
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 7.8e-146 521.5 577 52.2
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 3.9e-145 519.2 576 51.2
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.9e-144 516.9 577 51.8
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 3.3e-144 516.2 580 52.4
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.1e-143 513.5 546 53.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 2.1e-143 513.5 577 52.7
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 6.2e-143 511.9 573 52.4
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 1.5e-141 507.3 573 52.0
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 7.5e-141 505.0 575 51.1
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 7.1e-139 498.4 573 51.8
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 1.2e-138 497.7 567 50.1
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 2.3e-137 493.4 567 50.1
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 2.3e-137 493.4 567 49.7
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.8e-134 483.8 567 50.8
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.8e-134 483.8 512 54.9
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.2e-133 481.1 572 49.8
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.7e-132 477.2 561 49.9
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 3.8e-132 476.1 567 48.1
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 2.4e-131 473.4 567 48.5
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 9.2e-131 471.5 567 48.0
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 8.7e-129 464.9 578 46.9
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 2.5e-128 463.4 572 47.4
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 4.3e-128 462.6 593 46.7
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.1e-126 458.0 551 48.5
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.1e-126 458.0 576 47.7
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 6.4e-124 448.7 567 47.4
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 5.4e-123 445.7 575 48.0
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.7e-122 443.4 511 50.9
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 1.8e-118 430.6 569 46.6
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 7.6e-117 425.2 573 47.3
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 8.1e-111 405.2 563 42.1
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 3.1e-110 403.3 496 49.2
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 3.1e-110 403.3 467 51.6
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.5e-109 399.4 434 53.5
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.3e-108 397.9 564 42.4
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 2.5e-107 393.7 414 56.5
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.6e-103 380.9 431 52.9
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 8.4e-100 368.6 354 57.9
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 5.5e-99 365.9 450 49.1
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.5e-96 357.8 356 55.9
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.2e-91 339.7 314 60.2
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.2e-91 339.7 314 60.2
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.6e-82 311.2 477 43.8
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.0e-81 307.0 572 39.0
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 5.3e-78 296.2 564 36.5
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 6.1e-66 256.1 269 55.0
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 6.1e-66 256.1 578 32.4
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 8.8e-65 252.3 193 63.2
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.5e-64 251.5 181 66.3
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.8e-63 246.5 560 33.8
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 3.4e-56 223.8 399 41.6
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 2.8e-55 220.7 163 66.3
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 8.6e-52 209.1 257 51.4
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 5.5e-51 206.5 172 60.5
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 6.8e-41 172.9 305 43.6
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 1.5e-40 171.8 255 43.5
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.3e-36 157.9 536 28.7
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.4e-30 138.7 112 63.4
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.6e-29 135.2 106 66.0
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.6e-26 125.2 126 53.2
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 2.4e-22 111.3 335 30.4
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 6.0e-21 106.7 156 41.7
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.5e-16 92.0 135 43.7
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 7.6e-16 89.7 100 50.0
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 7.8e-13 79.7 92 45.7
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 1.3e-07 62.4 209 25.4


User provided reference genes

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