Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34336 Striga asiatica HOM05D004807 ORTHO05D005915 1.8e-84 315.8 156 100.0
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 1.1e-22 110.5 135 48.9
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 6.3e-21 104.8 135 45.9
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 2.4e-20 102.8 180 38.9
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 2.6e-19 99.4 135 43.7
unitig_0.g511 Utricularia gibba HOM05D004807 ORTHO05D005915 6.7e-15 84.7 135 37.8
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 2.8e-13 79.3 184 32.6
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 5.9e-11 71.6 136 33.8
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 2.9e-10 69.3 135 34.8
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 5.0e-10 68.6 135 34.8
Dinv25023 Davidia involucrata HOM05D004807 ORTHO05D005915 1.9e-09 66.6 134 35.8
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 4.7e-08 62.0 137 32.1
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 4.7e-08 62.0 137 33.6
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 1.0e-07 60.8 136 30.9
CSS0045552 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 1.4e-07 60.5 65 44.6
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 1.4e-07 60.5 135 34.1
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.8e-07 60.1 136 30.9
Actinidia22073 Actinidia chinensis HOM05D004807 ORTHO05D005915 4.0e-07 58.9 145 29.7
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.0e-07 58.9 59 45.8
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.0e-07 58.9 59 45.8
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.0e-07 58.9 59 45.8
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 5.2e-07 58.5 59 45.8
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 5.2e-07 58.5 136 33.1
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 5.2e-07 58.5 43 62.8
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 8.8e-07 57.8 45 57.8
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 1.2e-06 57.4 45 57.8
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.2e-06 57.4 45 57.8
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 1.2e-06 57.4 59 44.1
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 1.5e-06 57.0 57 47.4
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 2.6e-06 56.2 45 55.6
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 2.6e-06 56.2 65 36.9
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 3.3e-06 55.8 65 43.1
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 4.4e-06 55.5 59 42.4
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 5.7e-06 55.1 153 30.1
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 7.5e-06 54.7 63 41.3
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 7.5e-06 54.7 64 42.2
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 9.7e-06 54.3 63 44.4
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 9.7e-06 54.3 45 53.3
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 9.7e-06 54.3 45 53.3


User provided reference genes

Program Settings