Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34334 Striga asiatica HOM05D005198 ORTHO05D006839 4.1e-138 494.6 227 100.0
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.8e-21 107.1 108 53.7
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.8e-21 107.1 90 58.9
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 3.1e-21 106.3 125 47.2
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 1.6e-20 104.0 125 48.0
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 1.6e-20 104.0 125 48.0
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 1.6e-20 104.0 125 47.2
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 2.0e-20 103.6 124 46.8
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 2.7e-20 103.2 125 46.4
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 2.7e-20 103.2 125 45.6
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 2.7e-20 103.2 65 70.8
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 3.5e-20 102.8 125 48.0
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 3.5e-20 102.8 125 46.4
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 4.5e-20 102.4 90 56.7
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 4.5e-20 102.4 65 72.3
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 4.5e-20 102.4 65 70.8
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 5.9e-20 102.1 65 70.8
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 5.9e-20 102.1 65 70.8
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 7.7e-20 101.7 90 57.8
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 7.7e-20 101.7 65 69.2
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 7.7e-20 101.7 90 56.7
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.0e-19 101.3 65 70.8
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 1.0e-19 101.3 65 70.8
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 1.0e-19 101.3 90 54.4
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 1.3e-19 100.9 90 55.6
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 1.3e-19 100.9 90 55.6
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 1.3e-19 100.9 90 55.6
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.3e-19 100.9 65 69.2
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 1.3e-19 100.9 90 55.6
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 1.7e-19 100.5 90 55.6
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 2.9e-19 99.8 125 45.6
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 2.9e-19 99.8 65 69.2
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 2.9e-19 99.8 90 55.6
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 3.8e-19 99.4 90 56.7
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 3.8e-19 99.4 65 69.2
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 3.8e-19 99.4 65 67.7
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 3.8e-19 99.4 65 67.7
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 5.0e-19 99.0 90 55.6
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 5.0e-19 99.0 90 55.6
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 5.0e-19 99.0 124 45.2
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 5.0e-19 99.0 90 54.4
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 5.0e-19 99.0 65 67.7
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 6.6e-19 98.6 90 53.3
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 6.6e-19 98.6 90 53.3
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 8.6e-19 98.2 90 53.3
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 8.6e-19 98.2 65 66.2
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 1.1e-18 97.8 65 67.7
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 1.1e-18 97.8 90 52.2
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.1e-18 97.8 65 66.2
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.1e-18 97.8 90 53.3
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 1.1e-18 97.8 90 53.3
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 1.1e-18 97.8 65 66.2
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.5e-18 97.4 124 44.4
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.9e-18 97.1 90 53.3
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.9e-18 97.1 65 64.6
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 5.6e-18 95.5 65 64.6
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 5.6e-18 95.5 125 44.0
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 5.6e-18 95.5 90 53.3
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 5.6e-18 95.5 124 42.7
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 5.6e-18 95.5 65 66.2
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 7.2e-18 95.1 90 51.1
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 9.5e-18 94.7 65 67.7
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 9.5e-18 94.7 125 43.2
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 9.5e-18 94.7 125 43.2
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 2.8e-17 93.2 64 62.5
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 2.8e-17 93.2 125 42.4
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 2.8e-17 93.2 125 42.4
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 2.8e-17 93.2 125 42.4
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 4.7e-17 92.4 65 63.1
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 4.7e-17 92.4 90 53.3
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 6.1e-17 92.0 105 47.6
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 6.1e-17 92.0 63 66.7
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 6.1e-17 92.0 65 61.5
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 8.0e-17 91.7 125 41.6
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 8.0e-17 91.7 65 63.1
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 8.0e-17 91.7 65 61.5
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 1.0e-16 91.3 90 53.3
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.8e-16 90.5 65 64.6
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 4.0e-16 89.4 125 40.0
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 5.2e-16 89.0 65 60.0
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 6.8e-16 88.6 65 61.5
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 2.6e-15 86.7 125 38.4
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 3.4e-15 86.3 65 64.6
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 7.5e-15 85.1 150 38.7
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 7.5e-15 85.1 65 55.4
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 9.8e-15 84.7 124 40.3
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.2e-14 83.6 54 70.4
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 3.2e-13 79.7 51 70.6
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 3.2e-13 79.7 51 70.6
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 5.4e-13 79.0 92 46.7
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.6e-12 77.4 91 44.0
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.6e-12 77.4 51 64.7
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.3e-11 74.3 65 56.9
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 3.3e-10 69.7 72 50.0
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 4.3e-10 69.3 91 40.7
SGA_v2.0_scaffold54G19619 Striga asiatica HOM05D005198 ORTHO05D400672 7.3e-10 68.6 65 56.9
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 2.8e-09 66.6 72 48.6
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 2.8e-09 66.6 72 48.6
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 4.7e-09 65.9 111 38.7
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 1.0e-08 64.7 72 48.6
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 6.8e-08 62.0 65 41.5
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 1.2e-07 61.2 104 40.4


User provided reference genes

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