Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34308 Striga asiatica HOM05D013449 ORTHO05D015621 6.6e-139 497.3 236 100.0
Migut.H01983 Erythranthe guttata HOM05D013449 ORTHO05D015621 1.4e-80 303.5 258 61.6
Cc05_g11310 Coffea canephora HOM05D013449 ORTHO05D015621 9.7e-66 254.2 280 51.4
Nitab4.5_0002252g0050 Nicotiana tabacum HOM05D013449 ORTHO05D015621 8.0e-60 234.6 265 48.3
Nitab4.5_0000383g0220 Nicotiana tabacum HOM05D013449 ORTHO05D015621 1.8e-59 233.4 265 47.9
Peaxi162Scf00027g00041 Petunia axillaris HOM05D013449 ORTHO05D015621 4.0e-59 232.3 264 46.6
Sopen10g003290 Solanum pennellii HOM05D013449 ORTHO05D015621 4.0e-59 232.3 267 47.9
Solyc10g007190.2 Solanum lycopersicum HOM05D013449 ORTHO05D015621 2.0e-58 229.9 267 47.6
PGSC0003DMG400021271 Solanum tuberosum HOM05D013449 ORTHO05D015621 2.0e-58 229.9 267 47.6
Oeu051120.1 Olea europaea HOM05D013449 ORTHO05D015621 1.1e-32 144.4 100 70.0
PGR119G1573 Punica granatum HOM05D013449 ORTHO05D015621 1.8e-19 100.5 74 59.5
Hma1.2p1_0321F.1_g124180 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-15 86.3 100 39.0
Hma1.2p1_0915F.1_g236340 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.0e-15 85.5 114 43.0
Rhsim04G0000200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-13 81.3 71 50.7
Rhsim04G0001200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-13 81.3 71 50.7
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 2.1e-07 60.5 71 46.5
CsaV3_4G001940 Cucumis sativus L. HOM05D000030 ORTHO05D000009 1.7e-06 57.4 70 44.3
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.7e-06 57.4 84 42.9
Os01g0698300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.7e-06 57.4 50 54.0
Duzib192G0387 Durio zibethinus HOM05D000030 ORTHO05D000009 2.3e-06 57.0 80 43.8
Sabra03G0017900 Salix brachista HOM05D000030 ORTHO05D000009 2.3e-06 57.0 119 33.6
MELO3C032856.2 Cucumis melo HOM05D000030 ORTHO05D000009 3.0e-06 56.6 91 38.5
Duzib235G0631 Durio zibethinus HOM05D000030 ORTHO05D000009 3.0e-06 56.6 81 43.2
Gohir.D06G119650 Gossypium hirsutum HOM05D000030 ORTHO05D000009 3.0e-06 56.6 106 36.8
Gorai.010G137500 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.0e-06 56.6 106 36.8
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.0e-06 56.6 57 43.9
Sed0004433 Sechium edule HOM05D000030 ORTHO05D000009 3.0e-06 56.6 67 43.3
HPP92_024324 Vanilla planifolia HOM05D013449 ORTHO05D015621 3.0e-06 56.6 52 42.3
Ciclev10025036m.g Citrus clementina HOM05D000030 ORTHO05D000009 3.9e-06 56.2 102 37.3
CSS0038209 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.1e-06 55.8 75 40.0
THA.LOC104800438 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 5.1e-06 55.8 83 38.6
Thecc.04G131800 Theobroma cacao HOM05D000030 ORTHO05D010590 5.1e-06 55.8 76 42.1
Thecc.04G172000 Theobroma cacao HOM05D000030 ORTHO05D010590 5.1e-06 55.8 65 49.2
HPP92_003916 Vanilla planifolia HOM05D000030 ORTHO05D000009 5.1e-06 55.8 50 54.0
Aqoxy7G03637 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 8.6e-06 55.1 73 41.1
CARHR074460 Cardamine hirsuta HOM05D000030 ORTHO05D000009 8.6e-06 55.1 88 39.8
ECA232G4030 Erigeron canadensis HOM05D000030 ORTHO05D000009 8.6e-06 55.1 66 42.4
Gohir.A06G114704 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.6e-06 55.1 89 38.2
Thecc.06G030400 Theobroma cacao HOM05D000030 ORTHO05D000009 8.6e-06 55.1 81 42.0
TWI12G0050 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 8.6e-06 55.1 82 41.5
VMungo1080G0581 Vigna mungo HOM05D000030 ORTHO05D000009 8.6e-06 55.1 77 45.5


User provided reference genes

Program Settings