Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.2e-79 299.7 143 100.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 4.7e-63 244.6 141 83.7
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 9.7e-61 236.9 132 84.1
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.2e-58 229.9 132 79.5
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.2e-58 229.9 132 82.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.6e-58 229.6 140 75.0
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 2.0e-58 229.2 133 80.5
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.6e-58 228.8 139 76.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.5e-58 228.4 132 81.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.5e-58 228.0 132 79.5
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 5.9e-58 227.6 135 77.0
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 5.9e-58 227.6 135 78.5
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.0e-57 226.9 135 77.0
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.7e-57 226.1 136 77.2
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.9e-57 225.3 135 77.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 5.0e-57 224.6 133 78.2
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.5e-57 224.2 132 81.1
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 8.5e-57 223.8 138 75.4
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.5e-56 223.0 141 74.5
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.9e-56 222.6 132 76.5
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.2e-56 221.9 132 78.0
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.2e-55 219.9 132 77.3
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.6e-55 219.5 132 76.5
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.7e-55 218.8 135 74.8
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 3.6e-55 218.4 132 76.5
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 4.7e-55 218.0 139 75.5
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 4.7e-55 218.0 132 76.5
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 6.1e-55 217.6 135 75.6
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.0e-54 216.9 132 76.5
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.4e-54 216.5 132 77.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.4e-54 216.5 135 75.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.8e-54 216.1 135 76.3
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.3e-54 215.7 132 75.0
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 3.0e-54 215.3 133 75.2
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 4.0e-54 214.9 135 74.1
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.0e-54 214.9 128 79.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.2e-54 214.5 136 72.1
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 5.2e-54 214.5 133 73.7
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 5.2e-54 214.5 132 72.0
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 6.7e-54 214.2 133 75.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 2.0e-53 212.6 139 75.5
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.4e-53 211.5 133 72.2
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 4.4e-53 211.5 132 70.5
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 5.7e-53 211.1 142 70.4
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 9.7e-53 210.3 133 72.2
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.7e-53 210.3 132 73.5
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.3e-52 209.9 135 74.8
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 2.2e-52 209.1 132 72.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 2.2e-52 209.1 147 70.1
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.8e-52 208.8 132 72.0
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.8e-52 208.8 132 71.2
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.7e-52 208.4 135 73.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 4.8e-52 208.0 132 75.8
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 4.8e-52 208.0 132 70.5
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.1e-51 206.8 143 67.8
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.4e-51 206.5 116 83.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.8e-51 206.1 141 70.9
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.8e-51 206.1 133 75.9
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.4e-51 205.7 116 83.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.1e-51 205.3 132 72.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.1e-51 205.3 132 72.0
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 4.1e-51 204.9 133 74.4
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 7.0e-51 204.1 132 75.8
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 7.0e-51 204.1 142 69.7
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 9.1e-51 203.8 134 70.9
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 9.1e-51 203.8 134 70.9
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 4.5e-50 201.4 132 71.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.0e-49 200.3 133 69.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.0e-49 200.3 132 73.5
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.3e-49 199.9 130 73.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.3e-49 199.9 130 73.8
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 2.2e-49 199.1 136 72.1
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 2.9e-49 198.7 135 70.4
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.8e-49 198.4 133 71.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 5.0e-49 198.0 134 72.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 5.0e-49 198.0 133 69.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 6.5e-49 197.6 133 72.2
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 8.5e-49 197.2 134 70.9
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.1e-48 196.8 133 67.7
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.5e-48 196.4 133 68.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-48 196.4 133 68.4
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.9e-48 196.1 133 69.2
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 2.5e-48 195.7 132 67.4
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 3.2e-48 195.3 132 69.7
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.2e-48 194.9 133 67.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 4.2e-48 194.9 140 69.3
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.2e-48 194.9 124 72.6
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.2e-48 194.9 124 72.6
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 7.2e-48 194.1 136 68.4
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 9.4e-48 193.7 133 67.7
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 9.4e-48 193.7 135 68.9
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-47 193.4 135 68.1
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.6e-47 191.8 136 67.6
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 8.0e-47 190.7 136 67.6
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.4e-46 189.9 133 69.2
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.8e-46 189.5 106 80.2
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.3e-46 189.1 136 66.9
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.0e-46 188.7 116 75.0
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 4.0e-46 188.3 136 66.9
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 5.2e-46 188.0 120 72.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 5.2e-46 188.0 133 67.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 8.8e-46 187.2 120 72.5
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.2e-45 186.8 137 64.2
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.0e-45 186.0 132 64.4
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 7.5e-45 184.1 131 67.2
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.8e-44 182.2 132 63.6
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.8e-44 182.2 127 68.5
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 8.3e-44 180.6 132 63.6
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 9.1e-43 177.2 113 71.7
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.9e-41 172.2 109 73.4
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.3e-40 168.7 131 62.6
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 9.5e-40 167.2 120 67.5
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 2.8e-39 165.6 108 71.3
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.0e-38 163.7 132 60.6
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.7e-34 149.1 131 50.4
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.8e-34 147.5 100 70.0
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.3e-33 146.0 115 54.8
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.6e-33 144.4 106 64.2
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 8.6e-33 144.1 106 62.3
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.1e-32 143.7 89 73.0
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.9e-32 142.9 124 51.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.9e-32 142.9 123 51.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.9e-32 142.9 126 50.8
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.5e-32 142.5 123 52.8
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.6e-31 139.8 107 61.7
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 5.8e-29 131.3 83 71.1
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 2.4e-27 125.9 84 69.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.0e-25 119.0 90 63.3
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.2e-23 113.6 116 45.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.5e-16 87.4 53 75.5
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 4.0e-14 82.0 83 51.8
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 8.6e-09 64.3 58 51.7


User provided reference genes

Program Settings