Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 7.6e-89 330.5 169 100.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 2.2e-43 179.5 170 63.5
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 8.6e-40 167.5 154 66.2
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.8e-38 162.5 168 59.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 3.0e-37 159.1 174 59.2
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 3.0e-37 159.1 177 55.9
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 6.8e-37 157.9 124 71.0
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 8.9e-37 157.5 111 75.7
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.5e-36 156.8 171 56.7
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.5e-36 156.8 124 68.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.5e-36 156.8 124 68.5
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 7.5e-36 154.5 164 56.1
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.3e-35 153.7 111 73.0
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 3.7e-35 152.1 111 73.0
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 3.7e-35 152.1 111 73.0
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 4.9e-35 151.8 136 63.2
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.4e-34 150.2 153 58.8
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.8e-34 149.8 172 54.7
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.8e-34 149.8 115 71.3
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.4e-34 149.4 171 56.7
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.4e-34 149.4 159 57.9
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 2.4e-34 149.4 163 57.7
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 3.1e-34 149.1 166 56.6
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 4.1e-34 148.7 164 57.3
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 5.4e-34 148.3 126 65.9
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 5.4e-34 148.3 115 69.6
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 7.0e-34 147.9 105 75.2
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 7.0e-34 147.9 114 71.1
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 9.2e-34 147.5 122 64.8
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.6e-33 146.7 158 55.1
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.0e-33 146.4 173 55.5
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.0e-33 146.4 164 54.3
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.0e-33 146.4 148 57.4
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 2.7e-33 146.0 120 65.0
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 2.7e-33 146.0 109 73.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 2.7e-33 146.0 125 65.6
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 2.7e-33 146.0 125 65.6
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.7e-33 146.0 160 56.2
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 3.5e-33 145.6 164 54.3
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 4.5e-33 145.2 120 66.7
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 5.9e-33 144.8 148 56.8
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 5.9e-33 144.8 184 54.9
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 5.9e-33 144.8 107 72.9
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 7.8e-33 144.4 142 59.2
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 7.8e-33 144.4 180 52.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.0e-32 144.1 152 56.6
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.3e-32 143.7 105 73.3
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.3e-32 143.7 159 54.1
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 2.3e-32 142.9 105 71.4
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 2.9e-32 142.5 133 62.4
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 2.9e-32 142.5 177 50.8
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.9e-32 142.5 105 72.4
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 3.9e-32 142.1 139 57.6
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 5.0e-32 141.7 123 62.6
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 6.6e-32 141.4 105 70.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 8.6e-32 141.0 115 67.8
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 8.6e-32 141.0 129 60.5
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.1e-31 140.6 105 71.4
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.1e-31 140.6 105 71.4
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.1e-31 140.6 105 71.4
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.1e-31 140.6 124 64.5
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.1e-31 140.6 115 67.8
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.5e-31 140.2 105 70.5
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.5e-31 140.2 105 70.5
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.5e-31 140.2 123 61.8
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.5e-31 140.2 123 61.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.9e-31 139.8 105 71.4
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.9e-31 139.8 105 71.4
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.9e-31 139.8 105 70.5
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.9e-31 139.8 174 51.7
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.5e-31 139.4 166 53.0
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 3.3e-31 139.0 150 54.7
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.3e-31 139.0 152 56.6
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.3e-31 139.0 123 61.8
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.3e-31 138.7 105 70.5
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 7.3e-31 137.9 105 71.4
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 9.5e-31 137.5 165 49.1
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-30 137.1 123 61.0
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.6e-30 136.7 105 69.5
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.6e-30 136.7 165 51.5
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.8e-29 133.3 162 50.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 6.8e-29 131.3 158 48.7
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 2.0e-28 129.8 167 47.3
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.4e-28 129.0 105 63.8
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 1.1e-26 124.0 160 48.8
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.9e-26 123.2 77 80.5
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.9e-26 123.2 112 64.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 7.0e-26 121.3 110 59.1
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.7e-24 116.7 110 58.2
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.1e-23 114.0 63 85.7
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 3.3e-23 112.5 130 52.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.2e-22 110.5 90 66.7
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 2.8e-22 109.4 86 64.0
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.8e-22 109.4 74 68.9
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 6.2e-22 108.2 116 54.3
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 8.0e-22 107.8 67 76.1
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.1e-21 107.5 62 80.6
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 4.1e-18 95.5 103 53.4
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.6e-17 93.6 64 67.2


User provided reference genes

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