Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.6e-216 755.7 362 100.0
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.4e-135 486.9 384 62.5
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 4.3e-129 465.3 405 58.5
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 6.1e-128 461.5 403 58.3
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 6.4e-117 424.9 411 54.0
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 8.4e-101 371.3 411 48.4
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 4.1e-100 369.0 363 52.6
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 7.8e-99 364.8 382 48.2
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 3.0e-98 362.8 373 52.0
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 5.6e-97 358.6 380 47.6
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 7.3e-97 358.2 380 47.4
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.8e-95 353.6 366 50.5
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 2.4e-95 353.2 414 46.4
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 4.0e-95 352.4 394 46.7
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 1.7e-93 347.1 383 47.3
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.0e-91 338.6 408 44.4
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 2.3e-90 336.7 396 47.0
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 6.6e-90 335.1 395 45.3
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 1.9e-89 333.6 389 45.0
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 2.5e-89 333.2 402 44.3
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 4.3e-89 332.4 395 45.3
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 7.3e-89 331.6 425 45.6
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.6e-88 330.5 414 44.0
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 3.6e-88 329.3 398 43.5
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 6.2e-88 328.6 366 47.0
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.4e-87 327.4 414 43.7
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.4e-87 327.4 414 42.5
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.1e-87 326.2 434 41.9
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 3.1e-87 326.2 414 43.0
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 5.3e-87 325.5 382 46.3
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 1.2e-86 324.3 405 43.2
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 1.5e-86 323.9 398 43.7
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.5e-86 323.9 398 43.7
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 2.0e-86 323.6 428 42.8
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 5.8e-86 322.0 394 45.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 7.6e-86 321.6 418 44.5
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.3e-85 320.9 399 43.9
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.3e-85 320.9 407 44.5
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 2.2e-85 320.1 373 45.8
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 2.9e-85 319.7 407 41.8
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 3.8e-85 319.3 414 42.8
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 3.8e-85 319.3 392 45.2
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 4.9e-85 318.9 405 43.7
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 4.9e-85 318.9 408 42.4
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 8.4e-85 318.2 395 45.1
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.9e-84 317.0 401 43.9
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 3.2e-84 316.2 417 43.9
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.2e-84 316.2 401 43.6
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 4.2e-84 315.8 381 46.2
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.6e-83 313.9 406 43.1
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 2.1e-83 313.5 367 45.2
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 2.1e-83 313.5 417 41.7
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 2.7e-83 313.2 387 43.2
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 4.6e-83 312.4 445 42.2
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 6.0e-83 312.0 405 43.0
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 3.0e-82 309.7 411 41.8
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 5.1e-82 308.9 383 45.4
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.5e-81 307.4 381 44.9
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.5e-81 307.4 396 43.7
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 5.6e-81 305.4 396 43.4
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 7.4e-81 305.1 365 46.0
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 9.6e-81 304.7 398 44.5
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 3.7e-80 302.8 384 43.2
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 3.7e-80 302.8 396 42.7
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 4.8e-80 302.4 387 44.7
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 1.8e-79 300.4 394 42.6
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 5.3e-79 298.9 395 42.0
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 5.3e-79 298.9 409 41.1
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 6.9e-79 298.5 417 40.5
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 6.9e-79 298.5 367 43.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 6.4e-77 292.0 426 40.1
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 6.4e-77 292.0 340 46.5
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 5.5e-76 288.9 386 42.5
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 7.1e-76 288.5 337 46.0
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 1.8e-74 283.9 420 40.5
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.3e-72 277.7 414 40.6
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 4.8e-72 275.8 418 40.4
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 3.1e-71 273.1 387 41.1
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 4.0e-71 272.7 364 42.0
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.5e-70 270.8 362 42.5
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 2.0e-70 270.4 376 40.2
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 2.6e-70 270.0 366 42.6
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 3.4e-70 269.6 437 37.3
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 7.6e-70 268.5 364 42.3
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 7.6e-70 268.5 368 42.9
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.9e-69 266.5 396 40.7
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 4.9e-69 265.8 367 42.2
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.1e-68 264.6 369 42.0
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.1e-68 264.6 369 42.0
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 9.3e-68 261.5 350 41.4
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 1.2e-67 261.2 366 41.0
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.2e-67 261.2 366 41.0
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 2.7e-67 260.0 366 41.8
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 4.6e-67 259.2 366 40.7
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 7.9e-67 258.5 366 41.0
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.8e-66 257.3 353 41.6
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 5.9e-62 242.3 427 36.8
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 3.9e-58 229.6 249 46.2
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 7.4e-57 225.3 398 37.4
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 4.2e-52 209.5 191 54.5
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 5.3e-39 166.0 134 58.2
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 1.1e-36 158.3 446 26.9
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 1.4e-34 151.4 388 29.1
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.7e-30 137.1 375 28.8
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 3.5e-30 136.7 444 24.8
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.9e-30 136.0 144 47.9
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 2.2e-29 134.0 141 47.5
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.9e-28 131.0 152 46.1
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 2.2e-24 117.5 301 28.9
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 7.7e-22 109.0 80 60.0
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 5.0e-21 106.3 164 41.5
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 4.9e-16 89.7 75 58.7
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.5e-14 83.6 70 54.3
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 5.6e-12 76.3 58 53.4
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 3.2e-07 60.5 43 62.8


User provided reference genes

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