Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06224 Striga asiatica HOM05D007553 ORTHO05D009123 5.4e-58 227.6 130 100.0
Migut.N03014 Erythranthe guttata HOM05D007553 ORTHO05D009123 5.8e-20 101.3 106 58.5
MSTRG.24545 Avicennia marina HOM05D007553 ORTHO05D009123 4.6e-17 91.7 105 56.2
Migut.G00798 Erythranthe guttata HOM05D007553 ORTHO05D009123 6.2e-14 81.3 120 54.2
Cpa.g.sc9.240 Carica papaya HOM05D007553 ORTHO05D009123 2.9e-11 72.4 112 51.8
Ah.07g203320 Amaranthus hybridus HOM05D007553 ORTHO05D009123 4.9e-11 71.6 83 62.7
AUR62002498 Chenopodium quinoa HOM05D007553 ORTHO05D009123 4.9e-11 71.6 108 52.8
Ciclev10022861m.g Citrus clementina HOM05D007553 ORTHO05D009123 6.4e-11 71.2 103 55.3
TWI15G0237 Tripterygium wilfordii HOM05D007553 ORTHO05D009123 3.2e-10 68.9 148 43.9
EL10Ac3g06183 Beta vulgaris HOM05D007553 ORTHO05D009123 1.2e-09 67.0 94 56.4
Manes.01G009500 Manihot esculenta HOM05D007553 ORTHO05D009123 2.1e-09 66.2 77 50.6
DCAR_027488 Daucus carota HOM05D007553 ORTHO05D009123 1.0e-08 63.9 111 51.4
Sc13g0008070 Simmondsia chinensis HOM05D007553 ORTHO05D009123 1.0e-08 63.9 81 50.6
Oeu061884.1 Olea europaea HOM05D007553 ORTHO05D009123 1.7e-08 63.2 112 53.6
TAR365G1148 Trochodendron aralioides HOM05D007553 ORTHO05D009123 2.3e-08 62.8 76 59.2
QL10p064915 Quercus lobata HOM05D007553 ORTHO05D009123 3.0e-08 62.4 122 44.3
Thecc.05G000600 Theobroma cacao HOM05D007553 ORTHO05D009123 3.9e-08 62.0 118 46.6
Potri.007G146401 Populus trichocarpa HOM05D007553 ORTHO05D009123 1.5e-07 60.1 109 47.7
PGR042G0659 Punica granatum HOM05D007553 ORTHO05D009123 5.6e-07 58.2 89 48.3
Aqoxy3G03896 Aquilegia oxysepala HOM05D007553 ORTHO05D009123 1.3e-06 57.0 73 58.9
MD02G1000700 Malus domestica HOM05D007553 ORTHO05D009123 2.1e-06 56.2 121 47.9
Manes.05G208400 Manihot esculenta HOM05D007553 ORTHO05D009123 2.1e-06 56.2 108 47.2
Oeu014976.1 Olea europaea HOM05D007553 ORTHO05D009123 2.1e-06 56.2 97 52.6
Atru.chr3.1958 Acer truncatum HOM05D007553 ORTHO05D009123 3.6e-06 55.5 125 39.2
AL5G42060 Arabidopsis lyrata HOM05D007553 ORTHO05D009123 3.6e-06 55.5 116 44.0
Hma1.2p1_0513F.1_g169770 Hydrangea macrophylla HOM05D007553 ORTHO05D009123 6.2e-06 54.7 86 53.5
SHI01179 Sapria himalayana HOM05D007553 ORTHO05D009123 6.2e-06 54.7 64 59.4


User provided reference genes

Program Settings