Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06221 Striga asiatica HOM05D007257 ORTHO05D008924 3.1e-53 211.5 102 100.0
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 1.2e-17 93.2 108 50.0
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 8.0e-17 90.5 109 50.5
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 4.0e-16 88.2 116 44.8
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 1.3e-14 83.2 121 43.0
Rhsim09G0003300 Rhododendron simsii HOM05D007257 ORTHO05D008924 6.4e-14 80.9 111 45.0
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 1.2e-12 76.6 118 43.2
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 2.0e-12 75.9 109 42.2
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 2.7e-12 75.5 105 45.7
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 4.6e-12 74.7 114 43.0
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 4.6e-12 74.7 114 43.0
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 6.0e-12 74.3 114 42.1
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 1.0e-11 73.6 115 43.5
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 1.0e-11 73.6 114 38.6
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 3.0e-11 72.0 108 43.5
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 3.0e-11 72.0 118 43.2
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 3.9e-11 71.6 110 37.3
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 3.9e-11 71.6 110 37.3
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 3.9e-11 71.6 116 37.9
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 8.6e-11 70.5 117 40.2
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 8.6e-11 70.5 110 37.3
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 8.6e-11 70.5 116 39.7
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 3.3e-10 68.6 120 38.3
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 3.3e-10 68.6 119 39.5
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 3.3e-10 68.6 117 41.9
Carub.0005s2662 Capsella rubella HOM05D007257 ORTHO05D008924 7.3e-10 67.4 117 38.5
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 9.5e-10 67.0 116 38.8
Sopen12g032450 Solanum pennellii HOM05D007257 ORTHO05D008924 1.2e-09 66.6 117 40.2
Nn7g37449 Nelumbo nucifera HOM05D007257 ORTHO05D008924 2.1e-09 65.9 108 38.0
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 2.8e-09 65.5 122 36.1
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 2.8e-09 65.5 114 36.8
Phvul.002G279900 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 2.8e-09 65.5 105 36.2
Nn1g09433 Nelumbo nucifera HOM05D007257 ORTHO05D008924 4.7e-09 64.7 109 34.9
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 6.2e-09 64.3 117 41.0
Peaxi162Scf00057g00224 Petunia axillaris HOM05D007257 ORTHO05D008924 6.2e-09 64.3 109 39.4
Psat5g055880 Pisum sativum HOM05D007257 ORTHO05D008924 8.0e-09 63.9 105 37.1
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 1.4e-08 63.2 117 41.9
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 1.4e-08 63.2 106 42.5
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 1.8e-08 62.8 108 32.4
BcaC02g12345 Brassica carinata HOM05D007257 ORTHO05D008924 2.3e-08 62.4 110 33.6
C04p04930 Brassica napus HOM05D007257 ORTHO05D008924 2.3e-08 62.4 110 33.6
BolC4t22123H Brassica oleracea HOM05D007257 ORTHO05D008924 2.3e-08 62.4 110 33.6
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 3.1e-08 62.0 109 35.8
Ah.07g203290 Amaranthus hybridus HOM05D007257 ORTHO05D008924 3.1e-08 62.0 122 36.1
Sp4g26100 Schrenkiella parvula HOM05D007257 ORTHO05D008924 3.1e-08 62.0 109 33.0
EL10Ac3g06173 Beta vulgaris HOM05D007257 ORTHO05D008924 4.0e-08 61.6 129 35.7
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 4.0e-08 61.6 105 40.0
Solyc12g017960.1 Solanum lycopersicum HOM05D007257 ORTHO05D008924 4.0e-08 61.6 102 41.2
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 5.2e-08 61.2 109 38.5
A05p04160 Brassica napus HOM05D007257 ORTHO05D008924 8.9e-08 60.5 110 33.6
BraA05t19402Z Brassica rapa HOM05D007257 ORTHO05D008924 8.9e-08 60.5 110 33.6
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla HOM05D007257 ORTHO05D008924 8.9e-08 60.5 73 43.8
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 1.2e-07 60.1 117 35.0
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 1.2e-07 60.1 119 34.5
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.2e-07 60.1 116 33.6
PGSC0003DMG400020384 Solanum tuberosum HOM05D007257 ORTHO05D008924 1.2e-07 60.1 103 40.8
AT3G59880 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 1.5e-07 59.7 124 37.1
CARHR139190 Cardamine hirsuta HOM05D007257 ORTHO05D008924 1.5e-07 59.7 102 35.3
Sp5g03270 Schrenkiella parvula HOM05D007257 ORTHO05D008924 1.5e-07 59.7 121 38.8
TPR.G7792 Trifolium pratense HOM05D007257 ORTHO05D008924 1.5e-07 59.7 108 39.8
Thhalv10001750m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 2.0e-07 59.3 109 36.7
Sopen12g009180 Solanum pennellii HOM05D007257 ORTHO05D008924 2.6e-07 58.9 106 39.6
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 3.4e-07 58.5 102 37.3
BcaC01g05192 Brassica carinata HOM05D007257 ORTHO05D008924 3.4e-07 58.5 100 37.0
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 3.4e-07 58.5 112 38.4
Sabra07G0115500 Salix brachista HOM05D007257 ORTHO05D008924 3.4e-07 58.5 104 36.5
TAR365G0873 Trochodendron aralioides HOM05D007257 ORTHO05D008924 3.4e-07 58.5 103 38.8
AT2G44010 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 4.4e-07 58.2 110 35.5
BraA03t11669Z Brassica rapa HOM05D007257 ORTHO05D008924 4.4e-07 58.2 105 34.3
DCAR_023792 Daucus carota HOM05D007257 ORTHO05D008924 5.8e-07 57.8 119 37.8
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 5.8e-07 57.8 106 36.8
BcaC07g40552 Brassica carinata HOM05D007257 ORTHO05D008924 7.5e-07 57.4 124 37.9
C08p34830 Brassica napus HOM05D007257 ORTHO05D008924 7.5e-07 57.4 124 37.9
BcaB02g08925 Brassica carinata HOM05D007257 ORTHO05D008924 9.8e-07 57.0 109 32.1
Sed0023616 Sechium edule HOM05D007257 ORTHO05D008924 9.8e-07 57.0 114 34.2
BcaC07g40438 Brassica carinata HOM05D007257 ORTHO05D008924 1.3e-06 56.6 124 37.9
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 1.3e-06 56.6 119 34.5
Glyma.08G006200 Glycine max HOM05D007257 ORTHO05D008924 1.3e-06 56.6 119 36.1
AL4G42890 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 1.7e-06 56.2 110 34.5
A09p52160 Brassica napus HOM05D007257 ORTHO05D008924 1.7e-06 56.2 124 37.9
BraA09t40647Z Brassica rapa HOM05D007257 ORTHO05D008924 1.7e-06 56.2 124 37.9
Carub.0004s2657 Capsella rubella HOM05D007257 ORTHO05D008924 1.7e-06 56.2 109 34.9
CARHR170210 Cardamine hirsuta HOM05D007257 ORTHO05D008924 1.7e-06 56.2 123 35.8
MELO3C008506.2 Cucumis melo HOM05D007257 ORTHO05D008924 2.2e-06 55.8 118 35.6
BolC8t51085H Brassica oleracea HOM05D007257 ORTHO05D008924 2.9e-06 55.5 124 37.1
Dinv24749 Davidia involucrata HOM05D007257 ORTHO05D008924 2.9e-06 55.5 78 41.0
Oeu039258.1 Olea europaea HOM05D007257 ORTHO05D008924 2.9e-06 55.5 107 39.3
AL5G42000 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 3.7e-06 55.1 124 31.5
CANSAT01G1842 Cannabis sativa HOM05D007257 ORTHO05D008924 8.3e-06 53.9 121 33.1
CsaV3_2G011240 Cucumis sativus L. HOM05D007257 ORTHO05D008924 8.3e-06 53.9 117 36.8


User provided reference genes

Program Settings