Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 1.1e-93 346.7 179 100.0
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 1.3e-57 226.9 180 71.1
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 2.2e-49 199.5 179 66.5
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 3.7e-49 198.7 178 64.6
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 1.4e-48 196.8 178 62.9
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 4.1e-48 195.3 177 61.6
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 1.5e-47 193.4 178 62.4
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 2.6e-47 192.6 176 63.1
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 3.4e-47 192.2 179 64.8
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 4.5e-47 191.8 180 61.7
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 5.9e-47 191.4 155 71.0
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 5.9e-47 191.4 177 61.0
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 1.3e-46 190.3 179 64.2
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 2.9e-46 189.1 174 60.9
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 5.0e-46 188.3 183 60.7
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 8.5e-46 187.6 177 59.3
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 1.1e-45 187.2 189 60.3
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 1.9e-45 186.4 179 63.1
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 1.9e-45 186.4 179 63.1
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 3.2e-45 185.7 178 58.4
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 5.5e-45 184.9 187 61.0
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 5.5e-45 184.9 185 61.6
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 1.2e-44 183.7 186 61.8
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 1.2e-44 183.7 190 58.4
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 1.6e-44 183.3 184 60.3
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 3.6e-44 182.2 160 65.0
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 4.6e-44 181.8 180 63.3
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 6.1e-44 181.4 178 61.2
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 7.9e-44 181.0 190 57.9
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 1.4e-43 180.3 149 65.1
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 1.4e-43 180.3 148 69.6
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 3.9e-43 178.7 183 59.0
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 8.8e-43 177.6 179 58.7
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 8.8e-43 177.6 178 58.4
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 8.8e-43 177.6 184 57.6
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 2.5e-42 176.0 194 55.7
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 5.7e-42 174.9 189 57.1
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 5.7e-42 174.9 179 57.5
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 5.7e-42 174.9 189 54.5
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 9.7e-42 174.1 198 56.1
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 6.3e-41 171.4 189 56.6
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 1.8e-40 169.9 177 58.8
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 5.3e-40 168.3 176 59.1
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 9.1e-40 167.5 189 56.1
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 1.2e-39 167.2 134 64.9
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 2.0e-39 166.4 182 57.1
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 2.6e-39 166.0 182 56.6
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 1.3e-38 163.7 189 57.1
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 1.3e-38 163.7 170 57.6
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 8.5e-38 161.0 149 64.4
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 8.5e-38 161.0 181 54.7
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 7.2e-37 157.9 188 53.7
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 2.7e-36 156.0 176 57.4
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 3.6e-36 155.6 185 54.6
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 1.8e-35 153.3 185 53.0
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 1.8e-35 153.3 184 53.8
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 1.8e-35 153.3 185 53.0
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 1.8e-35 153.3 185 53.0
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 6.7e-35 151.4 130 66.9
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 1.5e-34 150.2 133 67.7
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 4.4e-34 148.7 179 53.1
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 9.7e-34 147.5 182 50.0
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 3.7e-33 145.6 133 61.7
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 3.7e-33 145.6 188 50.0
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 1.1e-32 144.1 185 53.0
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 1.4e-32 143.7 181 51.9
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 2.4e-32 142.9 189 50.3
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 2.4e-32 142.9 180 52.8
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 4.1e-32 142.1 134 59.0
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 7.0e-32 141.4 179 51.4
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 7.0e-32 141.4 181 52.5
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 9.1e-32 141.0 182 52.2
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 1.2e-31 140.6 179 52.0
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 1.5e-31 140.2 183 51.9
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 3.5e-31 139.0 134 62.7
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 3.5e-31 139.0 183 50.8
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 4.5e-31 138.7 181 51.9
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 5.9e-31 138.3 179 50.8
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 1.3e-30 137.1 180 48.9
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 5.0e-30 135.2 110 76.4
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 1.5e-29 133.7 133 61.7
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 5.5e-29 131.7 182 50.5
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 9.4e-29 131.0 187 49.2
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 3.6e-28 129.0 178 48.9
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 4.7e-28 128.6 188 47.3
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 8.0e-28 127.9 178 48.9
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 1.0e-27 127.5 181 50.3
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 1.5e-26 123.6 142 56.3
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 2.0e-26 123.2 188 48.4
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 3.3e-26 122.5 167 49.1
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 9.7e-26 120.9 208 43.3
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 1.7e-25 120.2 171 48.5
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 8.2e-25 117.9 180 48.9
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 1.4e-24 117.1 134 51.5
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 5.3e-24 115.2 152 51.3
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 1.7e-22 110.2 130 53.1
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 1.7e-22 110.2 106 58.5
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 1.9e-21 106.7 137 49.6
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 2.5e-21 106.3 152 47.4
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 4.2e-21 105.5 149 46.3
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 9.4e-21 104.4 145 49.0
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 4.0e-19 99.0 184 41.3
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 1.2e-18 97.4 192 40.1
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 2.6e-18 96.3 201 40.8
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 4.4e-18 95.5 190 40.0
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 2.2e-17 93.2 200 38.5
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 1.2e-15 87.4 115 52.2
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 4.0e-11 72.4 152 37.5
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 6.3e-09 65.1 92 43.5
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 1.8e-08 63.5 152 36.8


User provided reference genes

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