Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 4.5e-225 784.3 394 100.0
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 1.5e-180 636.3 393 84.2
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 1.2e-172 610.1 395 79.7
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 8.6e-168 594.0 393 77.9
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 5.2e-165 584.7 389 76.3
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 3.4e-164 582.0 389 75.6
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 2.2e-163 579.3 394 76.9
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 1.9e-162 576.2 399 73.4
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 7.1e-162 574.3 396 75.8
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 7.1e-162 574.3 396 75.8
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 7.1e-162 574.3 396 75.5
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.2e-161 573.5 391 74.4
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 2.1e-161 572.8 384 75.8
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 3.5e-161 572.0 396 74.2
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 6.0e-161 571.2 386 73.8
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 1.3e-160 570.1 371 76.3
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 1.3e-160 570.1 371 76.3
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 1.3e-160 570.1 369 77.5
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.7e-160 569.7 389 74.3
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 3.0e-160 568.9 370 77.6
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 3.9e-160 568.5 396 73.0
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 3.9e-160 568.5 390 74.4
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 3.9e-160 568.5 395 72.7
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 5.1e-160 568.2 394 73.4
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 5.1e-160 568.2 396 74.5
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 5.1e-160 568.2 393 74.6
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 6.6e-160 567.8 394 73.9
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 1.5e-159 566.6 389 74.6
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 1.9e-159 566.2 369 77.2
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 1.9e-159 566.2 369 77.2
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 2.5e-159 565.8 399 72.7
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 3.3e-159 565.5 390 73.8
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 5.6e-159 564.7 390 73.8
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 5.6e-159 564.7 394 73.4
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 7.3e-159 564.3 390 73.8
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 7.3e-159 564.3 370 77.8
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 7.3e-159 564.3 389 73.8
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 7.3e-159 564.3 389 73.3
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 9.6e-159 563.9 395 71.9
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 9.6e-159 563.9 389 73.5
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 1.2e-158 563.5 390 73.6
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 1.2e-158 563.5 368 77.2
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.2e-158 563.5 381 75.3
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 1.2e-158 563.5 385 74.5
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 1.6e-158 563.1 392 74.2
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 2.1e-158 562.8 368 77.4
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 2.1e-158 562.8 391 74.7
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 2.8e-158 562.4 392 73.2
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 2.8e-158 562.4 395 73.4
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 3.6e-158 562.0 390 73.3
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 3.6e-158 562.0 397 72.3
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 3.6e-158 562.0 385 74.5
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 4.7e-158 561.6 389 74.0
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 4.7e-158 561.6 379 76.3
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 4.7e-158 561.6 387 73.9
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 6.2e-158 561.2 376 76.1
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 8.1e-158 560.8 369 76.4
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 1.1e-157 560.5 367 76.3
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 1.4e-157 560.1 369 77.0
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 1.4e-157 560.1 369 77.0
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 1.4e-157 560.1 378 76.5
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 1.4e-157 560.1 369 75.6
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 1.8e-157 559.7 394 73.1
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 4.0e-157 558.5 368 76.6
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 5.2e-157 558.1 368 75.5
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 5.2e-157 558.1 385 74.3
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 6.9e-157 557.8 360 78.1
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.2e-156 557.0 384 72.9
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.5e-156 556.6 369 76.7
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 1.5e-156 556.6 392 73.0
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 2.0e-156 556.2 372 75.3
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 2.6e-156 555.8 384 74.2
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 4.4e-156 555.1 395 74.7
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 5.8e-156 554.7 384 73.4
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 7.6e-156 554.3 370 76.5
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 9.9e-156 553.9 397 72.5
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 1.3e-155 553.5 392 72.7
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 1.3e-155 553.5 368 75.8
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 3.8e-155 552.0 360 76.7
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 4.2e-154 548.5 390 72.3
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 4.2e-154 548.5 350 78.3
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 5.4e-154 548.1 360 76.4
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 9.3e-154 547.4 385 72.5
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 1.6e-153 546.6 365 73.4
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 2.1e-153 546.2 400 70.5
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 1.3e-152 543.5 370 74.6
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 3.9e-152 542.0 357 75.6
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 6.6e-152 541.2 404 68.3
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 5.6e-151 538.1 394 70.1
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 7.3e-151 537.7 350 76.0
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 2.1e-150 536.2 370 75.1
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 2.8e-150 535.8 379 72.3
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 8.1e-150 534.3 370 74.1
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 3.1e-149 532.3 348 76.1
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.2e-148 530.4 375 73.3
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 3.4e-148 528.9 390 69.5
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.6e-142 510.0 369 70.5
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 1.1e-141 507.3 348 72.1
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 1.8e-141 506.5 394 69.0
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 9.0e-141 504.2 374 69.8
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 4.5e-140 501.9 304 81.9
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 6.4e-139 498.0 384 66.7
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 1.4e-138 496.9 365 70.1
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 3.8e-131 472.2 355 65.9
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 2.3e-128 463.0 368 63.6
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 8.2e-126 454.5 278 79.9
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 6.5e-123 444.9 275 81.1
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 6.9e-117 424.9 368 61.7
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 1.1e-111 407.5 270 75.6
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 2.0e-108 396.7 276 72.5
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 8.0e-105 384.8 279 68.1
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 1.0e-104 384.4 214 87.9
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 5.9e-100 368.6 327 61.5
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 2.9e-99 366.3 197 90.9
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 8.5e-99 364.8 222 82.9
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 1.3e-94 350.9 392 48.7
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 1.5e-90 337.4 336 52.7
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 2.0e-79 300.4 218 67.4
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 6.4e-70 268.9 335 45.4
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 1.5e-58 231.1 226 55.3
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 2.8e-57 226.9 121 90.1
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 3.3e-50 203.4 201 56.7
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 5.6e-42 176.0 104 81.7
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 8.7e-35 152.1 157 51.6
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 4.0e-32 143.3 98 76.5
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 5.3e-32 142.9 104 70.2
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.0e-27 128.6 87 72.4
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 5.1e-27 126.3 81 79.0
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 8.7e-27 125.6 87 74.7
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 1.4e-24 118.2 67 85.1
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 4.0e-24 116.7 70 80.0
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 3.9e-19 100.1 75 65.3
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 4.3e-18 96.7 70 67.1
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 7.4e-10 69.3 37 81.1


User provided reference genes

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