Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 2.9e-285 984.6 506 100.0
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 4.0e-202 708.4 484 74.8
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 1.9e-199 699.5 501 71.1
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 2.9e-192 675.6 510 65.9
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 3.8e-192 675.2 485 71.1
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 6.5e-192 674.5 525 66.1
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 3.2e-191 672.2 495 67.3
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 3.2e-191 672.2 529 66.0
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 9.3e-191 670.6 507 66.7
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 9.3e-191 670.6 510 68.2
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 9.3e-191 670.6 519 66.9
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.6e-190 669.8 514 67.9
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 7.9e-190 667.5 520 67.3
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 2.3e-189 666.0 522 66.7
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 2.5e-188 662.5 513 67.3
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 3.3e-188 662.1 496 66.5
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 5.7e-188 661.4 491 67.0
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 1.1e-186 657.1 502 66.1
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 1.8e-186 656.4 521 65.3
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 4.1e-186 655.2 480 66.2
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 2.0e-185 652.9 517 65.6
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 3.4e-185 652.1 522 64.6
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 1.3e-184 650.2 548 62.2
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.2e-184 649.4 468 67.5
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 3.5e-182 642.1 484 66.1
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 3.9e-181 638.6 512 63.5
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 5.1e-181 638.3 511 63.2
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 1.9e-180 636.3 488 64.8
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.5e-180 636.0 544 61.4
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 5.7e-180 634.8 492 65.4
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 5.7e-180 634.8 520 63.3
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 5.7e-180 634.8 511 61.3
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 9.7e-180 634.0 515 65.2
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 1.3e-179 633.6 491 63.5
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 3.7e-179 632.1 494 66.2
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 4.8e-179 631.7 524 62.2
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 4.8e-179 631.7 516 64.0
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 1.1e-178 630.6 514 64.4
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.1e-178 630.6 500 63.8
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.4e-178 630.2 518 61.8
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 1.5e-177 626.7 520 63.5
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.0e-177 626.3 508 64.2
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.0e-176 624.0 519 61.8
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.3e-176 623.6 491 63.1
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 2.2e-176 622.9 489 63.8
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 2.9e-176 622.5 500 63.0
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 2.9e-176 622.5 500 63.4
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 3.8e-176 622.1 491 62.9
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 3.2e-175 619.0 516 61.2
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 4.2e-175 618.6 500 62.2
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 5.5e-175 618.2 491 62.1
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 7.2e-175 617.8 496 62.9
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 7.2e-175 617.8 494 62.3
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 1.6e-174 616.7 571 59.4
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 6.1e-174 614.8 575 58.4
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 1.4e-173 613.6 492 63.2
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.4e-173 613.6 513 61.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 1.8e-173 613.2 513 61.2
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 6.7e-173 611.3 492 62.6
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 8.8e-173 610.9 507 62.9
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 1.5e-172 610.1 489 62.2
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 1.5e-172 610.1 491 61.9
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 2.5e-172 609.4 491 60.5
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 2.5e-172 609.4 497 62.2
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 5.7e-172 608.2 484 62.8
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 7.4e-172 607.8 490 62.9
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 1.3e-171 607.1 493 62.1
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 1.8e-170 603.2 485 62.7
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 9.1e-170 600.9 490 61.8
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 2.0e-169 599.7 702 48.1
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 7.7e-169 597.8 511 60.7
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 1.0e-168 597.4 494 61.9
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.2e-166 590.5 443 64.3
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 4.7e-166 588.6 493 61.7
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 3.9e-165 585.5 506 60.9
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 8.2e-163 577.8 503 58.3
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 1.8e-162 576.6 471 61.8
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 4.1e-162 575.5 518 60.6
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 9.1e-162 574.3 514 58.2
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.5e-161 573.5 515 55.7
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 5.9e-161 571.6 494 60.9
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 8.5e-160 567.8 494 59.1
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 6.7e-157 558.1 489 59.1
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 2.6e-156 556.2 465 64.5
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 2.0e-153 546.6 516 57.9
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.5e-153 545.4 424 64.6
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 6.5e-152 541.6 507 57.0
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.1e-146 524.2 482 58.7
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 8.3e-139 498.0 393 66.9
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 3.1e-138 496.1 391 66.8
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.8e-134 483.0 381 60.9
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 6.4e-131 471.9 366 64.8
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 4.3e-127 459.1 367 61.3
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 3.4e-124 449.5 274 76.6
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 7.3e-119 431.8 286 68.9
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 1.1e-117 427.9 290 67.2
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 5.2e-117 425.6 481 47.8
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 5.8e-116 422.2 296 66.6
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 2.9e-115 419.9 307 65.1
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 1.1e-114 417.9 499 45.7
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 3.2e-114 416.4 255 74.1
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 1.6e-113 414.1 291 65.6
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 5.8e-108 395.6 544 42.8
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 4.7e-102 375.9 492 42.3
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.7e-99 367.5 452 46.0
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.4e-90 337.8 384 51.3
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 1.9e-87 327.4 310 56.1
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 5.3e-85 319.3 257 63.4
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 2.7e-81 307.0 317 50.2
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 7.7e-60 235.7 459 33.6
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 1.4e-58 231.5 155 75.5
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.6e-57 228.0 468 33.3
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 1.3e-54 218.4 463 30.9
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.2e-54 217.6 307 44.6
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 2.4e-53 214.2 154 68.2
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 2.4e-53 214.2 154 68.2
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 2.6e-52 210.7 153 64.1
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 7.2e-50 202.6 140 70.7
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 6.1e-49 199.5 177 64.4
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 5.2e-48 196.4 153 68.0
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 1.2e-44 185.3 464 30.6
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-43 181.8 196 46.4
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.7e-41 174.1 103 77.7
CSS0015120 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.6e-36 158.3 126 73.8
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 4.1e-29 133.7 123 49.6
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 2.7e-28 131.0 106 61.3
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 7.2e-26 122.9 101 55.4
Medtr5g091610 Medicago truncatula HOM05D001363 ORTHO05D006839 5.9e-20 103.2 65 73.8
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 5.0e-19 100.1 59 78.0
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 2.1e-17 94.7 65 63.1
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 8.0e-17 92.8 65 67.7
Os02g0606100 Oryza sativa ssp. japonica HOM05D005198 ORTHO05D006839 5.2e-16 90.1 116 52.6
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 3.4e-15 87.4 74 52.7
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 1.4e-13 82.0 56 67.9
Lsat_1_v5_gn_5_150841 Lactuca sativa HOM05D005198 ORTHO05D004031 2.0e-12 78.2 47 74.5
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 3.5e-12 77.4 46 80.4
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 6.6e-11 73.2 434 21.0
BolC2t09126H Brassica oleracea HOM05D005198 ORTHO05D042013 7.3e-10 69.7 115 41.7
SGA_v2.0_scaffold649G53360 Striga asiatica HOM05D005198 ORTHO05D006839 7.3e-10 69.7 40 77.5
C02p30710 Brassica napus HOM05D005198 ORTHO05D042013 1.6e-09 68.6 115 40.9
COL.COLO4_29149 Corchorus olitorius HOM05D005198 ORTHO05D006839 1.0e-08 65.9 77 46.8
Lj4A14T51 Lonicera japonica HOM05D005198 ORTHO05D006839 6.8e-08 63.2 65 73.8
CARHR294550 Cardamine hirsuta HOM05D002708 ORTHO05D003516 7.5e-07 59.7 477 19.9
Medtr2g088350 Medicago truncatula HOM05D000088 ORTHO05D000830 2.2e-06 58.2 99 39.4


User provided reference genes

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