Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.6e-194 682.6 349 100.0
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 1.7e-90 337.0 317 58.0
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 8.1e-85 318.2 269 64.3
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.3e-82 310.8 266 61.3
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 2.9e-82 309.7 291 58.1
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 6.4e-82 308.5 265 60.4
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 1.9e-81 307.0 275 60.0
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 7.1e-81 305.1 275 58.2
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 1.6e-80 303.9 267 58.8
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 6.0e-80 302.0 281 56.9
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 6.0e-80 302.0 288 55.6
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.3e-79 300.8 271 58.3
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 3.9e-79 299.3 281 56.2
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 3.9e-79 299.3 301 52.5
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 3.9e-79 299.3 270 57.4
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 1.5e-78 297.4 265 57.0
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 4.3e-78 295.8 267 58.8
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 7.3e-78 295.0 300 52.7
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 9.6e-78 294.7 314 51.6
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.3e-77 294.3 290 54.1
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 3.6e-77 292.7 274 54.4
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.8e-77 292.4 248 60.1
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 8.1e-77 291.6 261 56.3
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 1.4e-76 290.8 265 56.6
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 1.8e-76 290.4 270 57.0
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 4.0e-76 289.3 266 54.9
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 5.3e-76 288.9 267 53.6
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 6.9e-76 288.5 268 55.6
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 2.6e-75 286.6 296 54.1
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 3.4e-75 286.2 266 54.1
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 4.5e-75 285.8 260 56.2
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 4.5e-75 285.8 260 56.2
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 4.5e-75 285.8 269 53.9
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.7e-74 283.9 266 54.9
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 2.2e-74 283.5 271 55.0
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 4.9e-74 282.3 262 56.5
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 6.4e-74 282.0 293 51.2
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.1e-73 281.2 265 55.5
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.4e-73 280.8 260 55.0
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.9e-73 280.4 277 53.8
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 3.2e-73 279.6 266 54.5
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 4.2e-73 279.3 267 53.6
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 5.4e-73 278.9 291 50.9
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 5.4e-73 278.9 266 53.0
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 7.1e-73 278.5 315 48.9
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 7.1e-73 278.5 266 53.4
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 9.3e-73 278.1 264 54.5
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.2e-72 277.7 269 54.3
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.6e-72 277.3 266 53.4
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 2.1e-72 276.9 281 52.0
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 3.5e-72 276.2 288 51.7
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 4.6e-72 275.8 250 56.0
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 4.6e-72 275.8 266 52.3
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.0e-71 274.6 265 51.3
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.0e-71 274.6 265 51.3
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.3e-71 274.2 264 53.0
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.8e-71 273.9 278 52.5
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 2.3e-71 273.5 250 55.2
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 2.3e-71 273.5 268 52.6
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 3.0e-71 273.1 263 51.7
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 3.9e-71 272.7 274 53.3
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 5.1e-71 272.3 270 52.2
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 5.1e-71 272.3 266 53.0
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 5.1e-71 272.3 270 52.6
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 8.7e-71 271.6 284 49.6
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 1.5e-70 270.8 322 47.8
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.5e-70 270.8 264 53.8
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 4.3e-70 269.2 265 51.3
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 9.6e-70 268.1 275 50.5
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 9.6e-70 268.1 266 53.0
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.3e-69 267.7 266 53.0
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.6e-69 267.3 314 46.8
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 2.8e-69 266.5 265 51.7
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 3.7e-69 266.2 262 52.7
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 4.8e-69 265.8 268 51.9
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 1.1e-68 264.6 250 56.0
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 3.1e-68 263.1 271 51.7
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 6.9e-68 261.9 250 53.6
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 9.9e-67 258.1 256 51.6
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 2.2e-66 256.9 287 46.7
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 7.1e-65 251.9 198 62.6
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 9.3e-65 251.5 269 49.8
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 6.0e-64 248.8 286 49.0
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.1e-62 244.6 231 53.7
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.5e-62 243.4 198 60.6
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.4e-60 237.7 196 61.2
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.9e-54 217.2 206 54.4
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 2.8e-53 213.4 214 54.7
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 4.8e-53 212.6 167 64.1
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 1.1e-49 201.4 237 45.6
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 9.3e-49 198.4 251 42.6
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.8e-47 194.1 167 58.1
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 6.7e-47 192.2 159 61.6
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 6.7e-47 192.2 159 61.6
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 1.5e-46 191.0 218 46.8
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.9e-46 190.7 237 42.6
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 2.5e-46 190.3 167 56.9
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 5.3e-44 182.6 159 57.2
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.5e-43 181.0 142 61.3
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 4.8e-37 159.5 169 50.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.0e-31 141.7 140 50.7
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 1.8e-31 141.0 155 47.7
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 4.5e-27 126.3 96 62.5
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.0e-26 125.2 298 31.2
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.5e-25 120.6 142 49.3
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.2e-19 101.7 92 52.2
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 5.0e-18 96.3 234 28.6
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 8.5e-18 95.5 180 36.1
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-14 84.3 44 79.5
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-14 84.3 44 79.5
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.0e-14 84.3 44 84.1
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.2e-09 66.6 38 81.6
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.2e-09 66.6 38 81.6
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.2e-08 65.1 41 75.6
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 4.7e-08 63.2 64 51.6
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 4.7e-08 63.2 93 41.9
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 6.1e-08 62.8 72 47.2
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 1.0e-07 62.0 161 26.7
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 1.8e-07 61.2 53 54.7
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.0e-07 60.1 31 83.9
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 4.0e-07 60.1 31 80.6
HanXRQChr12g0365531 Helianthus annuus HOM05D006283 ORTHO05D007727 4.4e-06 56.6 91 37.4


User provided reference genes

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