Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 0.0e+00 2520.3 1284 100.0
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 0.0e+00 1662.9 1285 67.5
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 0.0e+00 1519.2 1291 61.7
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 0.0e+00 1513.8 1291 61.6
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 0.0e+00 1312.7 1158 60.4
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1310.8 1286 54.4
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 0.0e+00 1301.6 1294 53.3
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 0.0e+00 1266.9 1294 53.0
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 0.0e+00 1248.8 1289 52.8
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 0.0e+00 1225.7 1285 51.1
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 0.0e+00 1221.8 1283 51.0
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 0.0e+00 1216.8 1282 51.3
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1215.3 1291 49.6
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1209.5 1291 49.4
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1203.3 1291 49.3
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 0.0e+00 1201.0 1287 49.4
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 0.0e+00 1194.5 1287 50.6
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 0.0e+00 1179.1 1401 46.5
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 0.0e+00 1175.2 1336 49.6
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 0.0e+00 1174.5 1311 50.3
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 0.0e+00 1169.8 1299 50.4
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1169.1 1291 48.6
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 0.0e+00 1160.6 1312 47.9
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 0.0e+00 1160.6 1273 48.4
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 0.0e+00 1147.9 1293 48.5
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 0.0e+00 1140.9 1301 48.3
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 0.0e+00 1139.4 1159 52.8
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 0.0e+00 1139.0 1271 47.8
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 0.0e+00 1133.2 1289 48.1
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 0.0e+00 1129.0 1284 47.7
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1122.8 1162 50.9
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1110.9 1281 47.1
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 0.0e+00 1107.8 1290 47.9
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 0.0e+00 1105.9 1281 48.1
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 0.0e+00 1105.9 1284 47.4
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1100.9 1281 46.9
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 0.0e+00 1094.3 1280 47.7
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 0.0e+00 1091.6 1281 46.8
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 0.0e+00 1084.7 1269 48.8
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 0.0e+00 1080.5 1286 44.6
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 0.0e+00 1075.5 1293 45.4
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 8.8e-312 1074.3 1283 45.3
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 1.5e-309 1066.6 1287 44.8
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 3.6e-308 1062.0 1290 45.0
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 8.1e-308 1060.8 1286 45.8
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 1.1e-307 1060.4 1281 47.4
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 1.4e-307 1060.1 1292 44.9
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 7.1e-304 1047.7 1290 44.9
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 7.1e-304 1047.7 1293 44.2
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 1.2e-303 1047.0 1278 46.5
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 7.9e-303 1044.3 1276 46.9
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 8.7e-302 1040.8 1285 44.7
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.5e-301 1039.3 1289 44.7
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 1.4e-299 1033.5 1320 45.4
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 8.4e-297 1024.2 1292 44.6
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 5.8e-290 1001.5 1293 44.1
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 7.6e-290 1001.1 995 54.3
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 4.2e-288 995.3 1134 47.7
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 7.9e-287 991.1 1307 43.0
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 3.0e-286 989.2 1292 44.0
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 1.5e-285 986.9 1173 47.0
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 1.6e-284 983.4 1285 43.5
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 2.8e-284 982.6 1297 43.6
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 5.3e-283 978.4 1290 42.8
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.7e-281 973.4 1291 42.4
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 3.2e-280 969.1 1293 42.8
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 1.2e-279 967.2 1298 43.0
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 3.6e-279 965.7 1279 42.7
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 1.1e-277 960.7 1064 47.7
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 2.0e-277 959.9 1151 46.2
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 1.3e-273 947.2 1286 42.4
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 5.0e-273 945.3 1298 41.8
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 1.9e-272 943.3 1130 45.6
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 1.9e-272 943.3 1033 52.2
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 2.0e-269 933.3 1238 42.2
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 2.0e-269 933.3 1298 41.4
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 2.6e-269 932.9 894 53.8
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 3.3e-269 932.6 1293 41.5
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 5.7e-269 931.8 1299 41.3
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 5.7e-269 931.8 1299 41.3
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 2.1e-263 913.3 1042 47.1
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 5.9e-258 895.2 1131 43.3
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.5e-256 889.8 1211 43.4
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 4.4e-253 879.0 1252 42.2
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 3.8e-249 865.9 1289 40.1
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 2.1e-247 860.1 1207 42.8
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.4e-230 804.3 1111 41.4
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 5.4e-227 792.3 763 54.3
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 2.7e-218 763.5 864 48.8
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 3.2e-211 740.0 1153 39.1
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 2.5e-192 677.2 1060 38.5
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 1.6e-191 674.5 765 49.8
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 1.4e-190 671.4 1345 34.3
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 4.9e-180 636.3 1009 38.6
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.0e-177 628.6 846 40.8
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 4.5e-165 586.6 463 64.8
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 7.9e-162 575.9 800 42.1
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 1.3e-156 558.5 477 60.2
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 6.5e-156 556.2 653 46.6
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 1.7e-143 515.0 654 45.1
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.2e-141 508.8 715 42.7
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 9.4e-131 472.6 586 44.4
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 1.8e-118 431.8 406 57.4
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.3e-108 399.1 469 47.3
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.9e-103 381.3 657 37.3
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.1e-99 369.4 477 43.8
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 5.8e-96 357.1 1335 26.1
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 3.9e-84 317.8 1256 24.0
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 3.1e-81 308.1 360 47.5
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 3.2e-62 245.0 381 37.0
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 1.0e-60 240.0 606 32.5
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 4.5e-56 224.6 397 34.8
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 5.5e-54 217.6 384 35.4
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 3.0e-44 185.3 170 55.9
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.0e-43 182.6 271 41.0
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 2.6e-35 155.6 140 55.0
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 4.4e-35 154.8 190 45.8
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.8e-34 152.1 133 56.4
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 6.3e-34 151.0 191 42.4
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 3.1e-33 148.7 207 41.5
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 9.1e-33 147.1 137 55.5
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 5.3e-25 121.3 114 55.3
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 3.8e-23 115.2 137 45.3
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 6.1e-21 107.8 107 48.6
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 1.3e-15 90.1 503 21.3
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 1.0e-12 80.5 93 49.5
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.2e-11 77.0 128 35.9
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 8.3e-10 70.9 63 52.4
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 2.9e-07 62.4 75 40.0
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 3.8e-07 62.0 108 34.3
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 8.6e-07 60.8 70 45.7


User provided reference genes

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